Solanum lycopersicum (tomato): 101258447
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Entry
101258447 CDS
T02665
Name
(RefSeq) nuclear pore complex protein NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101258447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101258447
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101258447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101258447
NCBI-ProteinID:
XP_004235653
UniProt:
A0A3Q7FX05
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Position
3:complement(65951127..65954907)
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AA seq
335 aa
AA seq
DB search
MSTAVRTPKTGRQSLFFQDLATPISSRKSGSKFNTPGQAAAVSALWRENFASSDLPPPPV
FTLEDRSDVSPESGIPEYITSPEIKSDPRTPVLNSGREFSTPKSKSEASTSYALMGKQQQ
QSKQSPLPSLTWWSPAKGSGSAEQDDKDKGSPVEGVVHPGALITLPPPREVARPEIRKNS
IPVGNLNEEEWVTVYGFSPIDTNSVLREFEKCGVILKHILGPRDANWMHILYQNRADAQK
ALNKNGMQINGVLMIGVKPVDPTQRQALDDRLNKQGFIPLPHAPTSKSNDPTPFRTSSQP
CYLQNGSNSAKQSSGSVATPARSVVSKIVDLMFGV
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagcagtgcgaaccccgaaaactggaagacaatcactgttcttccaggattta
gctacacctatttcttcccggaaatctgggtcgaaattcaatacaccaggtcaggcagca
gctgtttctgctttatggcgtgagaattttgccagttcagatctgccaccaccgcctgta
tttacccttgaagatcgatcggatgtctctccggaatcggggattcctgaatatattact
tcgccagaaatcaagtcggaccctagaacgccggtgcttaattcaggacgggaattttca
acacctaagagtaagtctgaggcaagtacttcatatgcactgatgggtaagcagcagcaa
cagagtaaacaaagccccttgccaagtttgacatggtggtcacctgcaaagggtagtggt
agtgctgagcaggatgacaaggacaaaggttcgccagtagaaggcgtcgtacatcctggt
gctttgataaccttacctccaccaagggaagttgcaaggccagagatcaggaagaactca
atccctgtgggaaaccttaatgaggaagaatgggtcacagtttatgggttttccccaatt
gacaccaattcagttttacgggaatttgagaaatgtggtgtcattttgaaacacattctg
ggcccccgagatgctaattggatgcacattctctatcagaatcgtgctgatgctcaaaaa
gctcttaacaagaacggtatgcagataaatggagttcttatgattggggttaaaccagtg
gatccaacacaacgtcaggcactggatgataggctcaacaagcagggatttataccttta
ccgcatgctccaaccagtaaaagcaatgacccgactccatttagaacctcctctcaacct
tgttatctccaaaatggcagcaatagtgcaaagcaatcatctggatccgttgccacccca
gcgagatccgttgtgtctaaaattgtcgacttaatgtttggtgtctaa
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