Solanum lycopersicum (tomato): 101258647
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Entry
101258647 CDS
T02665
Name
(RefSeq) ras-related protein Rab7-like
KO
K07897
Ras-related protein Rab-7A
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
sly04145
Phagosome
sly04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101258647
04145 Phagosome
101258647
04148 Efferocytosis
101258647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101258647
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101258647
04031 GTP-binding proteins [BR:
sly04031
]
101258647
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
101258647
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101258647
Exosomal proteins of other body fluids (saliva and urine)
101258647
Exosomal proteins of colorectal cancer cells
101258647
Exosomal proteins of bladder cancer cells
101258647
GTP-binding proteins [BR:
sly04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
101258647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
GTP_EFTU
MMR_HSR1
ATP_bind_1
AAA_16
nSTAND3
RsgA_GTPase
AAA_7
Septin
cobW
Motif
Other DBs
NCBI-GeneID:
101258647
NCBI-ProteinID:
XP_004237468
LinkDB
All DBs
Position
4:complement(51996698..52000208)
Genome browser
AA seq
219 aa
AA seq
DB search
MSQPLRSLLKVIVLGDCGVGKTSLVNQYVFKKFREQYKATIGADFATKELEIGERVVTLQ
IWDTAGQERFHSLGVAFYRGADCCILVYDVNVPKSFETLQHWHEEFIKQADLTEPEKFPF
VLIGNKVDLEYGSTEIVSEKQAREWCGCRGNIQNFMTSAKEDYNVDAAFLCAAQLALANE
DDHNIWQASLDEEMPSHCQLQRIPESVSGIEQQRGGCSC
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacctctaagaagtttgctcaaagtcattgttcttggtgattgtggggtggga
aaaacatctttggtgaaccaatatgttttcaagaagtttagggaacaatataaggcaaca
attggagctgattttgctactaaagaactagagattggtgaaagagtagtcacattgcaa
atatgggacacagcagggcaagaaaggtttcatagtcttggtgttgcattttatagagga
gcagattgttgcattcttgtatatgatgtgaatgtgcctaagtcatttgagactcttcaa
cattggcatgaagaatttatcaaacaggcagacctaacagagcctgaaaaattcccattt
gtcttgattggtaacaaagtagacttggaatatggcagcactgagatagtttcagagaag
caagcaagggaatggtgtggttgtagaggaaatatacaaaactttatgacctcagctaag
gaggattataatgttgatgctgcatttttgtgtgctgcacaacttgccctggccaatgaa
gatgatcacaacatctggcaggcatcattagatgaagaaatgccttctcattgtcaactc
caaagaataccagaatctgtatcaggaattgagcagcaaagaggaggatgttcatgttaa
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