KEGG   Solanum lycopersicum (tomato): 101258647
Entry
101258647         CDS       T02665                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04144  Endocytosis
sly04145  Phagosome
sly04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101258647
   04145 Phagosome
    101258647
   04148 Efferocytosis
    101258647
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101258647
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101258647
   04031 GTP-binding proteins [BR:sly04031]
    101258647
Membrane trafficking [BR:sly04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    101258647
Exosome [BR:sly04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101258647
  Exosomal proteins of other body fluids (saliva and urine)
   101258647
  Exosomal proteins of colorectal cancer cells
   101258647
  Exosomal proteins of bladder cancer cells
   101258647
GTP-binding proteins [BR:sly04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    101258647
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA GTP_EFTU MMR_HSR1 ATP_bind_1 AAA_16 nSTAND3 RsgA_GTPase AAA_7 Septin cobW
Other DBs
NCBI-GeneID: 101258647
NCBI-ProteinID: XP_004237468
LinkDB
Position
4:complement(51996698..52000208)
AA seq 219 aa
MSQPLRSLLKVIVLGDCGVGKTSLVNQYVFKKFREQYKATIGADFATKELEIGERVVTLQ
IWDTAGQERFHSLGVAFYRGADCCILVYDVNVPKSFETLQHWHEEFIKQADLTEPEKFPF
VLIGNKVDLEYGSTEIVSEKQAREWCGCRGNIQNFMTSAKEDYNVDAAFLCAAQLALANE
DDHNIWQASLDEEMPSHCQLQRIPESVSGIEQQRGGCSC
NT seq 660 nt   +upstreamnt  +downstreamnt
atgtcccaacctctaagaagtttgctcaaagtcattgttcttggtgattgtggggtggga
aaaacatctttggtgaaccaatatgttttcaagaagtttagggaacaatataaggcaaca
attggagctgattttgctactaaagaactagagattggtgaaagagtagtcacattgcaa
atatgggacacagcagggcaagaaaggtttcatagtcttggtgttgcattttatagagga
gcagattgttgcattcttgtatatgatgtgaatgtgcctaagtcatttgagactcttcaa
cattggcatgaagaatttatcaaacaggcagacctaacagagcctgaaaaattcccattt
gtcttgattggtaacaaagtagacttggaatatggcagcactgagatagtttcagagaag
caagcaagggaatggtgtggttgtagaggaaatatacaaaactttatgacctcagctaag
gaggattataatgttgatgctgcatttttgtgtgctgcacaacttgccctggccaatgaa
gatgatcacaacatctggcaggcatcattagatgaagaaatgccttctcattgtcaactc
caaagaataccagaatctgtatcaggaattgagcagcaaagaggaggatgttcatgttaa

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