Solanum lycopersicum (tomato): 101258649
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Entry
101258649 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K14574
ribosome maturation protein SDO1
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101258649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101258649
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101258649
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Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
101258649
NCBI-ProteinID:
XP_004237721
UniProt:
A0A3Q7G5U8
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All DBs
Position
4:57266897..57273530
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AA seq
372 aa
AA seq
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MSKTLLQPVGQKRLTNVAVVRLKKHGNRFEIACYKNKVLSWRSGVEKDVDEVLQSHTVYT
NVSKGVLAKSKDLIRAFGTDDQTKICLEILDKGELQVAGKERESQLSSQFRDIATIVMQK
TINPETQHPYTISMIERLMHEIHFAVDPNSSSKKQALEVIRELQKHYPVKRAPMRLRIHV
PEQSNPSVLDKLKEWNASIVSREESGSQHSIICEIEPSLFRDCDALIRNLQGRVEILAVN
VHVEGDTFVDQFDDHEDDSSSLRKDSTSSVLQLSEKMQKQTISSEIGNSREEQKLSKPAK
SGSSEGEVKLNRCTTCNAVVGDSKEYREHFKSDWHKHNLRRKTRQLPPLTAEECVADLEL
GDSKADLKEYSF
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagacgctacttcagcctgtaggccaaaagagacttaccaatgttgctgttgtg
cgtctcaagaagcatggtaaccgtttcgaaatcgcttgttataagaataaggtcctttca
tggcgctctggcgtagagaaagatgtggatgaagtgttgcagtcacatactgtttacacc
aatgtgtcaaagggtgtacttgcaaagtctaaagatttgattagggcttttggaactgat
gatcaaaccaaaatctgcctggagattttggacaaaggagagctgcaagttgcagggaag
gagagagaatcacagttgtcaagtcagttcagagatattgctaccatagttatgcagaag
acaatcaatcctgaaactcagcatccatacactattagcatgattgaacgtctaatgcat
gaaatccattttgcagttgatccaaatagtagctcaaagaaacaggcactggaggtcatt
cgggagcttcaaaagcattaccccgtaaaacgtgcccccatgaggttgaggattcatgta
ccagaacaaagcaatccttctgtcctggacaagcttaaggagtggaatgcctccattgtg
tcaagagaagaatctggaagtcagcactccattatttgtgaaattgagcctagtcttttc
cgggactgtgatgccttaataaggaatctacagggtagagtggaaattcttgcagtcaat
gtacatgtggagggggatactttcgtcgatcagtttgatgatcacgaggatgattcatca
agtttaaggaaggattctacaagttcagtccttcagctgagtgagaaaatgcaaaagcag
actatttcttcagaaatcgggaattctagggaagaacagaaactgagtaaacctgcaaaa
agtgggagttccgagggcgaagtaaaactgaacaggtgcactacttgcaatgctgttgtg
ggagattcaaaagaatacagagagcatttcaagagtgactggcataagcataacctaagg
cgtaaaactagacaactccctccacttacagctgaagaatgtgtggctgacctggaactt
ggggactcgaaggctgatctaaaagaatattcattttga
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