Solanum lycopersicum (tomato): 101258763
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Entry
101258763 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X2
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101258763
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
101258763
TFIIIC, fungi type
101258763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
TPR_19
TPR_2
TPR_8
TPR_1
TPR_17
TPR_6
TPR_16
TPR_11
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_12
TPR_15
TPR_7
TPR_20
NatA_aux_su
SNAP
TPR_NUP160_120_M
DUF7017
HAT_PRP39_C
HrpB1_HrpK
Suf
DNA_polI_exo1
Motif
Other DBs
NCBI-GeneID:
101258763
NCBI-ProteinID:
XP_004241851
LinkDB
All DBs
Position
6:complement(42542270..42560030)
Genome browser
AA seq
943 aa
AA seq
DB search
MEEEKTLTEFDAFEHPMELELELRDGEEGGEGDNDGDNNSKEADDEDEDVDEEEDDGSGE
YKFQFGAEMDPLAFTEEDAFGRQPYQQFEHLEHQYEALAAKKRKVQALPPSEIPAKKSRQ
EDRQEDGPGASYDEILEAMNYGMRKKSRKLKKRGRRKGSKSKVSPELTRKLGDATLHYAH
GRYEEAKLVLREVIRLSPNLPDPYHTLGLIYNAMGDKKRAMNFYMLAAHLSPKDASLWNL
LVAWSTEQGDRKQTRYCLSKAIKADPEDLSLRFQRASIYIELGDYQKAAEQYEQIARLCP
NDVGVLKTAVQFYSKCGKHECSVGILEDYLKNHPTEADLSVIHLLAVIHMEDNAHLKALD
LIEWAKQRYFTGKQMPFNLNIKAGICHLHLGHIEEAEIIFRAVQSENASQHPDIVTEVAD
SFMTLEYYESALKYYMMLVGDGNKNNGYLHLRIAQCYVFLKESVQAIEYFYKAVNELEDS
VDARLTLSSILLEDGKDDEAVSLLSPPKVSESSGDSSSDTSKSWWLSSKIKLKLCQIYRS
KGSLEACVDVIFPLIRETLFLKSVQPKVKVRRRLSKSVLNQRIKVVDDHQTDTIFHGFKP
VALASDLSKAARAKKLLRKKEMLKEAKKAAALAAGADWKSDDSDSEFPEEHVYREPPLPD
LLKDEEHLCLIVDLCKALISLQRYWDALEIINLCLKLASSTLSVEKKEELQALGAQVGYN
IADPIHGFDCARSIVSQHPYSFAAWNCYYKVISRLDNRHSKHSKFLNHMRVKHKDCIPPI
IIAGHQFTTISHHQDAAREYLEAYKLMPDNQLINLCIGSALVNVALGFRLLNKHQCVLQG
MAFLYNNLRLSGNSQEALFNFGRACHHVGLVSEAAIYYQRVLDTHEDDYPIPKLPNENPD
PVENRKPGYCDLRREAAYNLHLIYKNSGAHDLARQILKDYCTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaaaaaactttaacagagtttgatgccttcgaacacccaatggaattggaa
ctggaattgcgagacggagaagagggaggggaaggggacaacgacggagataacaacagt
aaagaggctgatgatgaagacgaagacgtagacgaagaagaagatgatggaagcggagag
tataaatttcaattcggagctgaaatggatcctctggcattcaccgaagaggacgccttt
ggacgccagccataccaacagtttgagcacctcgaacaccaatatgaagctctcgctgcc
aaaaagcggaaagttcaagccctacctcccagtgagatcccagcaaagaaatctaggcaa
gaagaccgtcaagaagatggtccaggagcaagctatgatgaaatattggaagctatgaat
tatgggatgaggaaaaaatcaaggaagctcaagaagagaggtcggcggaagggatcaaag
agtaaagttagtccagaattgacaagaaaacttggtgatgccactcttcattatgcacat
ggccgttacgaagaggccaaacttgtgttgcgtgaagtcattcgtctttcgccaaacctt
cctgatccataccatacacttggcctgatttacaatgctatgggtgataagaagagagct
atgaatttctacatgcttgcagcacatttgtcaccgaaggatgcatctctatggaatctc
ctggttgcttggtccacagagcagggagataggaagcagacccgctattgcctttccaaa
gcaataaaagcagaccctgaagaccttagtctaaggtttcaaagggcttcaatatatatt
gaacttggagattatcaaaaagctgcagagcagtacgaacaaattgctcgtctatgccct
aatgacgttggagtacttaagacggctgttcagttttacagcaaatgtggcaaacatgag
tgctctgttggtatcctcgaagactacctgaaaaatcatccaactgaagctgatttaagt
gtgatacatctgttagctgtgatacacatggaagacaatgcacatttaaaagctcttgat
ctaattgagtgggcaaagcagagatattttacagggaaacagatgccttttaatttaaat
atcaaagctggaatatgtcatttacatcttggccatatagaggaggcagagattattttc
cgtgctgtacaatctgaaaatgcatctcaacatcctgacatagtcactgaggtcgcggac
tcctttatgacacttgaatactatgaatcagctttgaagtactatatgatgcttgttgga
gatggcaacaaaaataatggctatttgcacttgagaattgcccagtgttatgtatttttg
aaggaaagcgtgcaagcaattgagtacttctataaagctgtaaatgaacttgaggatagt
gttgatgctcgattaaccttatcatcgatccttcttgaagatggcaaagatgatgaagca
gtttctttgctttcccctcccaaagtatcagaatcttcaggtgactcaagttctgataca
tcaaaatcttggtggcttagtagcaagataaagctgaagctttgccaaatttatagatct
aaagggtctctagaggcttgtgttgatgttatttttcctttgattcgtgagacattgttt
cttaagtctgtccaaccgaaggtcaaagtgcggagaaggctatctaaaagtgttctaaat
caaagaatcaaggttgtggacgatcaccaaacagataccatctttcatggctttaagcct
gtagctttggcatctgatctgtcaaaagctgcaagagcaaaaaaattgcttcggaagaaa
gaaatgttaaaggaagcaaaaaaagctgcagctttggctgctggagctgactggaaaagt
gacgattcggacagtgagtttcctgaggagcacgtataccgggagcctccactaccagat
cttctaaaagacgaggaacacctgtgccttattgtagatctctgcaaggctttaatatcc
ttgcaaaggtattgggatgcacttgagatcattaatctgtgtctaaaattggcatccagc
acattgtctgttgagaaaaaagaggagctgcaagctctaggagctcaagtaggatataac
attgctgatcccatccatgggttcgattgtgcacgttccattgtcagtcagcatccttac
agctttgcagcatggaattgctactacaaagtaatatcaagactagataatcggcattcg
aaacatagcaagttcttgaaccatatgcgtgtcaaacacaaagattgcataccaccaatt
attattgctggtcatcagtttaccacgatcagccatcatcaagatgcggctagagagtat
ttagaagcttataagctgatgccagataatcagttgataaatctctgtatcggaagtgct
ttagtaaatgtagctcttggattcagacttctgaacaagcatcagtgtgtattacaagga
atggctttcctgtacaataatttgaggctctcaggaaacagtcaggaagcactgtttaat
tttggtcgagcttgtcatcatgttggtcttgtttctgaagctgccatatattatcaaagg
gtacttgacactcatgaagacgattatcccatcccaaagcttcctaatgaaaacccagat
cccgtggaaaatagaaaaccaggttattgtgatctacgcagagaagcagcatacaatctg
cacttgatttacaaaaatagtggagcacatgatctggcaagacagatactgaaagattac
tgtactgtatga
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