Solanum lycopersicum (tomato): 101258786
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Entry
101258786 CDS
T02665
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101258786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101258786
Spliceosome [BR:
sly03041
]
Common components
Common spliceosomal components
SR proteins
101258786
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
RRM_occluded
RRM_5
RRM_fung
Motif
Other DBs
NCBI-GeneID:
101258786
NCBI-ProteinID:
XP_004230004
LinkDB
All DBs
Position
1:complement(83133583..83136869)
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AA seq
239 aa
AA seq
DB search
MRPLFVGNIEYDIRQPELERLFSKYGRIERLDMKSGFAFVYFEDERDAADAIRCLDNMPF
GYDKRRLSVEWAKGDRVQPRDDSKVSANQRPTRSLFVINFDPIRTRVRDIERHFEPYGKI
LNVRIRRNFAFVQFENLEDASKALECTHMSEILDRVVSVEYALRDDGERGDRYDSPRRDY
IRHGDSPYRRSPSPMYRRGRPSPDYGRPGIPAYDKYNGSSYDRYRSPEYGSYRRFPVRR
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctttattcgtggggaatatcgagtatgatatacgtcaaccagaactggagcga
ttgttctccaagtatggaaggatcgagcgtcttgacatgaaatctggctttgcgtttgtc
tactttgaggatgagcgtgatgcagctgatgccatccgttgtcttgataacatgccattt
gggtatgacaagcgccggttatcagtagaatgggcaaagggtgaccgtgttcaacctcgt
gatgattccaaggtttcagcaaaccaaagaccaacaagatctttgtttgtcattaatttt
gaccctattcgcactagggtgcgtgacatagagaggcattttgaaccgtatggaaagatc
cttaatgttcgaatacgccgaaattttgcgtttgtgcaatttgaaaatctggaagatgcc
tcaaaagccttggagtgtacacacatgagtgagatcctcgacagagttgtttctgtagag
tatgctttgagggatgatggtgagaggggtgacaggtatgatagccctagaagagactat
atcaggcatggtgatagtccttaccgaaggtcaccaagcccaatgtatcgcaggggtcga
cctagtcctgattatggtcgccctggtatccccgcatatgacaaatacaatggttcatct
tatgatcggtacaggagtcccgagtatggaagttaccgcaggtttcctgttcggaggtaa
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