Solanum lycopersicum (tomato): 101258791
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Entry
101258791 CDS
T02665
Name
(RefSeq) chloride channel protein CLC-c
KO
K05016
chloride channel 7
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sly01009
]
101258791
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101258791
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sly04040
]
101258791
Protein phosphatases and associated proteins [BR:
sly01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101258791
Membrane trafficking [BR:
sly04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
101258791
Ion channels [BR:
sly04040
]
Chloride channels
Chloride channel (CLC)
101258791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
TAT_signal
Motif
Other DBs
NCBI-GeneID:
101258791
NCBI-ProteinID:
XP_004230422
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All DBs
Position
1:complement(87796362..87803450)
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AA seq
776 aa
AA seq
DB search
MMRKQEDIENEGVGVMVMEDGKDLERNISSEGGFREPLLKSKSRVNNTSQIAIIGANVCP
IESLDYDIVENDLFKQDWRSRKKVQIYQYIFLKWTLVLLIGLFTGLVGFFLNIAVENIAG
FKLLLASDLMLEDKYFRAFAIFAGCNLGLATCAAILCACIAPAAAGSGIPEVKAYLNGVD
AHSILAPSTLFVKIIGSVLGVSAGFVVGKEGPMVHTGACIANLLGQGGSRKYHLTWKWLR
YFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEVASWWRSALLWRTFFTTAIVAMV
LRSCIQFCRSGNCGLFGQGGLIMFDVNSGFPNYNTVDVLAVLTIGVLGGLLGSLYNYLVD
KVLRTYSIINERGPAFKIMLVMTISILTSLCAYGLPWFASCTPCPVGLEEKCPTVGRSGN
YKNFQCPAGHYNDLASLFMNTNDDAIRNLFSAENSSEFHLSTLFVFFAGVYCLGIITYGI
AIPSGLFIPVILAGASYGRLVGSVLGSVSNLNNGLFALLGAASFLGGTMRMTVSLCVILL
ELTNNLLMLPLVMLVLLVSKTVADSLNKGIYDQIVQMKGLPYLEAHAEPYMRQLAAGDVC
SGPLVTFSGVEKVGNIVHALKFTRHNGFPVVDLPPFSDAPEFCGLVLRSHLVVLLKGKTF
TKQNVLSGSNTLKKFHAFDFAKPGSGKGLKFEDLSFSPEEMEMYVDLHPITNTSPYTVVE
TMSLAKAAILFRELGLRHLCVVPKTTKRNPIVGILTRHDFMPEHIKGLYPHLVHHK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaaagcaagaagatatagaaaatgaaggagttggggtaatggtaatggaagat
gggaaggatttagagaggaatatttcatctgagggtggttttagagagccattgcttaaa
tcaaagagtagagtcaataatacatcacaaattgctattattggagccaatgtttgccct
attgagagtcttgattatgacattgttgaaaatgacctattcaagcaagattggagatca
aggaaaaaggtccagatatatcaatatatattccttaagtggacactcgtgcttcttatt
ggattgtttacaggacttgttggtttctttttaaacatagcagtggaaaatattgctggc
tttaagcttctgcttgctagtgatttaatgctcgaggataagtatttccgtgcatttgct
atttttgcaggttgcaatttgggtcttgcaacttgtgctgccatcctatgtgcatgtatt
gcacctgcagctgcagggtcaggaattcctgaagttaaagcatatttgaatggtgtggat
gctcattccattttagctcctagtactttatttgtaaagataattggttctgttttgggt
gtttctgctggatttgttgttggtaaggaaggacccatggtccacactggcgcttgcata
gctaacttacttgggcagggcggctcccgcaaatatcatctgacgtggaagtggctgagg
tattttaaaaatgaccgtgaccgcagagatttgatcacttgtggtgctgcagctggtgtt
gcagccgctttccgtgctccagttggtggtgttctttttgctctcgaagaagtagcctca
tggtggcgaagtgctctactttggaggactttcttcacaactgctatagtagctatggtg
ctcagatcttgcattcaattctgtcggagtgggaactgtggactatttggtcaaggaggt
ttgataatgtttgatgtgaattcaggatttcctaattataacactgtagatgtactggcg
gtattgacaattggagttcttggaggccttttaggaagcctttataattatcttgtggac
aaggtcctgcggacttacagcatcattaatgagagaggtcctgctttcaaaatcatgctc
gtaatgaccatttcgatcctgacttctctttgtgcatatggtcttccatggtttgcaagt
tgcacaccgtgccccgtaggcttggaggaaaaatgtcctactgtaggtcgctctggaaac
tataagaatttccagtgtccggctgggcattacaatgatctggcctccctgtttatgaat
accaatgatgacgccatccgcaatttgtttagtgcagaaaattcaagtgaattccacctt
tctacactttttgtcttcttcgctggggtatactgccttggcattattacctatggaatt
gctattccctctgggctgttcattcctgtcatacttgctggagcctcatatggacgtctt
gttggaagtgtcttaggttcggtctctaatcttaataatggcctgtttgcgctccttggg
gctgcctccttccttggtggtactatgaggatgacagtatcactctgtgtcatactactt
gagctcaccaataatctgctaatgcttccgttggtgatgcttgttctccttgtatcaaaa
actgtggccgatagtcttaacaagggtatctatgaccagattgtgcaaatgaaaggcttg
ccttacttggaagcacacgccgagccttacatgaggcaattggctgcaggagatgtttgt
tctgggcctttagtaacattttcaggtgttgagaaggtaggaaacatagtacacgctttg
aagtttactcgacacaatgggtttcccgtggttgatttaccaccattctcagacgcgcca
gagttttgtgggcttgttttaaggtcacatttagttgttttgctcaaaggaaagacattc
acgaaacaaaatgtactgagtggctccaatactctgaagaagtttcatgcatttgatttt
gcgaagccaggatcagggaaggggcttaagtttgaggatttgtccttctcccccgaggag
atggaaatgtatgttgatctccatcctatcacaaatacatctccatacacagtagtggaa
accatgtctctggccaaagctgcaattcttttccgtgaactcggtctcagacatttgtgt
gtcgtcccaaagactaccaagagaaatccaatagttggaatcttgacaaggcatgacttc
atgccagagcatataaagggactgtatccacatttggtccatcacaagtaa
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