Solanum lycopersicum (tomato): 101258961
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Entry
101258961 CDS
T02665
Symbol
SINA4
Name
(RefSeq) E3 ubiquitin ligase SINA4
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101258961 (SINA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101258961 (SINA4)
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101258961 (SINA4)
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101258961 (SINA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
DZR
Motif
Other DBs
NCBI-GeneID:
101258961
NCBI-ProteinID:
NP_001316370
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All DBs
Position
6:complement(38195296..38200611)
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AA seq
318 aa
AA seq
DB search
MEEMEMDSVECVSLMDGVEDEEIQSSIASHQYPLGKPNNILSAGNVPTSVHELLECPVCT
NSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLG
CPEIFPYYSKLKHETLCNFRPYSCPYAGSECSVTGDIPYLVTHLRDDHKVDMHTGCTFNH
RYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDETDARNYSY
SLEVGGNGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRI
WKEQQNQDGGVCIPNLGS
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaatggaaatggatagcgttgagtgtgtatcattaatggatggtgttgaagat
gaagagatccaatcttctattgcatctcatcaataccctttaggaaagcctaataacatt
ctttctgccggaaatgtccctactagtgtacatgaattgcttgaatgccctgtttgtaca
aattctatgtacccaccaattcaccagtgtcacaatgggcacacactttgttctacctgc
aaaacaagggtgcacaatagatgtccgacatgcagacaagagcttggtgatataaggtgt
ttagcgttagagaaggttgcggagtcacttgaactgccttgcaaatatttttctttgggg
tgcccagaaatattcccatattacagcaaacttaagcatgaaacattgtgcaattttaga
ccttacagttgcccatatgctgggtcagagtgctcagtgaccggggacatcccttatttg
gttacacatttaagagatgaccacaaagtggatatgcacacgggatgcacgttcaaccat
cgttatgtgaagtctaatcctcgtgaagtagaaaatgcaacatggatgttgacggtcttc
cattgttttgggcaatatttctgcctccattttgaggccttccagctcggcgtggcccct
gtttatatggcatttttacgattcatgggtgatgaaacggatgcacgtaattacagctac
agtctagaggtaggaggaaatggtagaaaactcatatgggagggtaccccaagaagtatc
cgagatagtcatcgcaaagtcagggacagtcatgacggtcttattatccagcgtaacatg
gcactcttcttttctggtggtgaccggaaagaactcaaacttcgagttactggaaggata
tggaaggaacaacaaaatcaagatggtggtgtgtgcataccaaatctaggtagctag
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