Solanum lycopersicum (tomato): 101259035
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Entry
101259035 CDS
T02665
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101259035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101259035
03110 Chaperones and folding catalysts [BR:
sly03110
]
101259035
03029 Mitochondrial biogenesis [BR:
sly03029
]
101259035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101259035
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101259035
Messenger RNA biogenesis [BR:
sly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101259035
Chaperones and folding catalysts [BR:
sly03110
]
Heat shock proteins
HSP60 / Chaperonin
101259035
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101259035
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101259035
Exosomal proteins of other body fluids (saliva and urine)
101259035
Exosomal proteins of breast cancer cells
101259035
Exosomal proteins of colorectal cancer cells
101259035
Exosomal proteins of bladder cancer cells
101259035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101259035
NCBI-ProteinID:
XP_004235655
LinkDB
All DBs
Position
3:complement(65940667..65946140)
Genome browser
AA seq
605 aa
AA seq
DB search
MAATFTSVCSISSTSQTVEKKIINSCETLSSFSGISLTSLGGRRKNNVLKKRNDSKIQAM
AKELHFNQDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAREV
ELEDPVENIGASLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPIQIARGI
DRTTKALVSELKKLSKEVEDSELADVAAVSAGNNYEVGNMIAEALSKVGRKGVVTLEEGR
GSENNLFVVEGMQFDRGYISPYFVTDNEKMVAEYENCKLLLVDKKITNARDLVNVLEEAI
KNGYPILVIAEDIEQEALATLVVNKLRGALKIAALKAPGFGDRKSQYLDDIAILTGGTVI
REEVGLYLDQAGSEVLGNAAKVVLSKDSTTIVGDGSTQDAVSKRVAQIKRLLEEAEQDYE
KEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVDEGIVVGGGCTLLR
LAAKVEGIKGTLDNDEQKIGADIVKRALRYPMKLIAKNAGVNGSVVIEKVLSNDNPNYGY
NAATGNYEDLMAAGIIDPTKVVRCCLEHAASVARTFLTSDAVVTEIKVPEPAVAGNPMDN
SGYGA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacatttacctccgtgtgttcaatttcttccactagccagacagttgagaaa
aagattatcaattcttgtgaaacgttatcttcattctctgggatatctttgacttcatta
gggggcaggagaaagaataatgttttaaagaagagaaatgattccaagatccaggctatg
gccaaggagttacacttcaatcaggatggttctgccattaagaagctccaagcaggtgtt
aacaagcttgcagatctagtaggtgtaactcttggtccaaaaggaagaaatgtagttctt
gagagcaaatatggctctccgaaaattgtaaatgatggtgttactgtggccagagaggtt
gaactagaagaccctgttgagaatattggtgcaagtttggtgagacaagctgcttcaaag
acgaatgacttggctggggatggaacaactacatccgttgttttggcacaggggctcata
acggagggtgttaaggttgttgcagctggtgcaaaccctattcagattgccaggggcatt
gacaggaccaccaaagccctggtttctgagctaaagaaattgtcaaaagaggtcgaggac
agtgaactagcagatgtagctgcggttagtgcaggaaacaactatgaagtaggaaatatg
atagcagaagccttgagtaaagtgggtaggaaaggtgtagtaactcttgaggaagggcgg
ggttctgagaacaacttatttgtcgtggaaggcatgcaatttgaccgtggctatatctct
ccatactttgttacggacaatgagaagatggtagctgaatatgaaaactgcaagctgctt
ctggtagacaaaaagataacaaatgcaagggatttagtcaatgttttggaagaagcaatc
aagaatggatacccaatattggtaatcgctgaagacatagaacaggaagctctagccaca
cttgttgtcaacaaattaagaggagcattgaaaattgctgctctcaaagctcctggtttt
ggagatcgaaaaagccaatatcttgatgacattgctatccttactggaggtactgtcatt
cgagaggaggttggtttatacctagaccaggctggaagtgaggtcttaggaaatgctgcc
aaggttgttttatcaaaggattcaacgacaattgttggtgatggtagtacacaggatgca
gtgagcaaaagagttgcacaaattaaaagactgcttgaggaagctgaacaagactacgag
aaggaaaaattgaatgagcgaattgcaaaactctctgggggtgttgccgttattcaggtt
ggtgcacaaactgaaacagaactcaaagaaaagaaattgagagtagaggatgcactcaat
gcgacaaaggcagctgttgacgaaggcattgtagttggcggtggatgcaccttattgcgg
cttgctgccaaagttgaaggcattaaaggaactcttgataatgatgaacaaaagattgga
gctgatattgtcaagagagctttgcgctaccctatgaagttaatagccaagaatgctggt
gttaatggaagtgttgtgattgagaaggtcttgtccaatgacaacccaaactatggttat
aacgcggccaccggaaactatgaagatttaatggctgctggtataattgatcctacaaaa
gtggtaagatgttgcttggagcatgcagcttcagttgcaaggacctttttgacatcagat
gctgttgtcactgagatcaaggtgcctgaacctgcagttgctgggaacccgatggacaat
tcaggctatggagcctag
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