KEGG   Solanum lycopersicum (tomato): 101259119
Entry
101259119         CDS       T02665                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03030  DNA replication
sly03410  Base excision repair
sly03420  Nucleotide excision repair
sly03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101259119
   03410 Base excision repair
    101259119
   03420 Nucleotide excision repair
    101259119
   03430 Mismatch repair
    101259119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sly03032]
    101259119
   03036 Chromosome and associated proteins [BR:sly03036]
    101259119
   03400 DNA repair and recombination proteins [BR:sly03400]
    101259119
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101259119
  DNA Replication Termination Factors
   ELG1-RFC complex
    101259119
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101259119
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101259119
  Check point factors
   HRAD17(Rad24)-RFC complex
    101259119
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid CNOT1_CAF1_bind DNA_pol3_delta2
Other DBs
NCBI-GeneID: 101259119
NCBI-ProteinID: XP_069150504
LinkDB
Position
2:complement(64383306..64385520)
AA seq 307 aa
MAFLREIYGDAICNISHDLRYFQIKETRPLQVVVPVSSSPHHIELNVQLEPNARYVIMAL
VKQITSEYALTPEISRVNKKADYKVIVLYNVDKAAENIQHLVKWIMDCYSDACKLILCCE
DDVAILDSVKSRSKVFEVAAPVTHEIMEVLIQIARKEDFELPMGFAAKIAAKSKQNLRRA
IMALEACKAHNYPFAEDQPISIGWEEVVTELAAEILADPNQTRLFSVRGKFQKLLVEFVH
PKLILLKLVEEFVKKVDAGIRREIHYWHSYYEKRLPLGTTALLKLEEFVAKFMSIYRKSL
SNRQQFL
NT seq 924 nt   +upstreamnt  +downstreamnt
atggcttttttgcgtgaaatctatggtgatgctatctgcaatatatcccatgatttgaga
tacttccaaattaaggaaacaaggccactgcaagttgtcgtaccagtaagctcaagtcct
caccatatcgagctcaacgttcagttggagcctaatgctagatatgtgataatggcttta
gttaagcaaataacttcagagtatgcactgacccctgaaatcagcagagtaaataagaag
gctgattacaaagttatagttctttataatgtggacaaagccgcggagaacatacagcac
ctagttaaatggataatggactgctattcagatgcttgcaagctcattctctgctgtgaa
gatgatgtagccatacttgactcagtgaaaagccgcagcaaagtttttgaagttgcagct
cctgtaactcatgaaatcatggaagttcttattcagatagcaagaaaggaagattttgaa
ctaccaatgggttttgctgctaagatagccgccaagtcaaagcaaaacctgcgaagagca
attatggctctagaagcctgcaaagcacacaactatccttttgctgaagaccaaccgatt
tcaataggatgggaagaagtagtaacagaacttgcagcagaaattctcgctgatcccaac
caaacaaggttattttctgttcgagggaagttccaaaaacttttggtggagtttgtgcat
ccaaaacttattctcctgaaactagttgaagaattcgttaagaaagttgatgctggtata
agaagggaaattcattactggcattcttattatgagaaaaggctccctcttggaacgact
gctttgttaaaattagaagaatttgtggccaaatttatgagcatatacaggaagagtttg
agcaatcgtcagcagtttttgtaa

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