Solanum lycopersicum (tomato): 101259119
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Entry
101259119 CDS
T02665
Name
(RefSeq) uncharacterized protein LOC101259119
KO
K10756
replication factor C subunit 3/5
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03030
DNA replication
sly03410
Base excision repair
sly03420
Nucleotide excision repair
sly03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101259119
03410 Base excision repair
101259119
03420 Nucleotide excision repair
101259119
03430 Mismatch repair
101259119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101259119
03036 Chromosome and associated proteins [BR:
sly03036
]
101259119
03400 DNA repair and recombination proteins [BR:
sly03400
]
101259119
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101259119
DNA Replication Termination Factors
ELG1-RFC complex
101259119
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101259119
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101259119
Check point factors
HRAD17(Rad24)-RFC complex
101259119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF4841
CNOT1_CAF1_bind
DNA_pol3_delta
Motif
Other DBs
NCBI-GeneID:
101259119
NCBI-ProteinID:
XP_004233724
LinkDB
All DBs
Position
2:complement(48715787..48719865)
Genome browser
AA seq
759 aa
AA seq
DB search
MEGASKYNKALQLKLSSTMRQRRSGYEPSDTETDWTLEKSPHREVNGKNEKEIDLEEHEP
EEPNVGFERAKDNSSFNLSWRTNNVPSSARRRSTKSPYKLRRDIDDGEFPSSPKALPRSV
STFPRRPDHSYSHRNVSPFQKSENRRHMSPYKYAGDDHDRIFADSNRKQNQTQGNNNVLS
RLGEKSNYNRRYASAPRPDRQHKFDASKERRKANNKTQTPSQLPVRSLSRKERETPYKHG
PTGGELNEMIAEAKISGSTTGANHMFESTETVSPGDIFFSRDYEALNMQKITERKFDKKP
QVLTDRNVESVKTPGNFNQSGRGNSSSNTQRTISTSTFVSRQSSNLSDTSGRTTKSMKKF
TANRQKSQSEPWFSCLKKGTCSTSRRESPEKGRPIDEAVVIAKASVVQSLRPFWADKHQP
DLLEGFTCHKQEALLLKDLVSSSEIIPQILFKGPPGSGRRTLTMAFLREIYGDAICNETR
PLQVVVPVSSSPHHIELNVQLEPNARYVIMALVKQITSEYALTPEISRVNKKADYKVIVL
YNVDKAAENIQHLVKWIMDCYSDACKLILCCEDDVAILDSVKSRSKVFEVAAPVTHEIME
VLIQIARKEDFELPMGFAAKIAAKSKQNLRRAIMALEACKAHNYPFAEDQPISIGWEEVV
TELAAEILADPNQTRLFSVRGKFQKLLVEFVHPKLILLKLVEEFVKKVDAGIRREIHYWH
SYYEKRLPLGTTALLKLEEFVAKFMSIYRKSLSNRQQFL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggagggagcttcaaaatataacaaagctttacaactgaaactctcgtcgaccatgagg
caaagaagaagtggttatgagccatcagatacggagacagactggacattggagaagagt
ccacacagggaagtaaacggaaagaatgaaaaagaaatagatcttgaagaacatgaacca
gaagagcccaacgtaggatttgagagagcaaaggacaatagttcttttaatttaagctgg
agaactaataatgttccaagttctgctcgaaggagaagtactaagtctccttataagctt
cgcagagatattgatgatggtgaatttccttcttctccaaaggctttaccaagaagtgtt
agcacatttccacgcagacctgatcattcatattctcatagaaatgttagtccttttcaa
aaatctgagaaccgtagacatatgtctccatataaatatgctggtgatgatcatgacagg
atttttgctgattcaaataggaagcaaaatcaaacacaaggtaataataatgttcttagt
agactaggggagaaatcaaattataatcgcaggtacgcttctgctcctagacctgacaga
caacacaagtttgatgcttccaaggagagaagaaaagcaaataataagacgcagacgcct
tcccaattgccagttaggagcttgtcgcggaaagaaagggaaactccctataagcacgga
cctacaggaggtgaacttaatgaaatgattgccgaagcaaagatttctggaagtactact
ggtgctaatcatatgtttgaaagcacagaaactgtttcacctggtgatattttcttttct
cgggactatgaagctttgaacatgcagaagattactgaaaggaaatttgataaaaagcct
caggtactgactgatagaaatgttgaatcagtgaaaacgcctggtaatttcaatcagagt
ggaagaggaaattcatctagtaatactcaaagaactataagcacaagcacttttgtaagt
agacagagtagtaatttgagtgatactagtggaaggacgaccaaaagtatgaaaaagttc
accgcgaacaggcaaaagagtcagtcagaaccatggttttcttgtctcaagaagggaaca
tgcagcacgtcaagaagagaatctccagaaaaagggcgtccgattgatgaagctgtagta
attgctaaggcatctgtagttcaaagcttgagacccttctgggctgacaagcatcaacct
gatttactagagggatttacttgccacaagcaagaagctttactacttaaagacctggtt
tcttcaagtgaaatcattccacagatcttattcaagggtcctcctggttctggaaggaga
acactcacgatggcttttttgcgtgaaatctatggtgatgctatctgcaatgaaacaagg
ccactgcaagttgtcgtaccagtaagctcaagtcctcaccatatcgagctcaacgttcag
ttggagcctaatgctagatatgtgataatggctttagttaagcaaataacttcagagtat
gcactgacccctgaaatcagcagagtaaataagaaggctgattacaaagttatagttctt
tataatgtggacaaagccgcggagaacatacagcacctagttaaatggataatggactgc
tattcagatgcttgcaagctcattctctgctgtgaagatgatgtagccatacttgactca
gtgaaaagccgcagcaaagtttttgaagttgcagctcctgtaactcatgaaatcatggaa
gttcttattcagatagcaagaaaggaagattttgaactaccaatgggttttgctgctaag
atagccgccaagtcaaagcaaaacctgcgaagagcaattatggctctagaagcctgcaaa
gcacacaactatccttttgctgaagaccaaccgatttcaataggatgggaagaagtagta
acagaacttgcagcagaaattctcgctgatcccaaccaaacaaggttattttctgttcga
gggaagttccaaaaacttttggtggagtttgtgcatccaaaacttattctcctgaaacta
gttgaagaattcgttaagaaagttgatgctggtataagaagggaaattcattactggcat
tcttattatgagaaaaggctccctcttggaacgactgctttgttaaaattagaagaattt
gtggccaaatttatgagcatatacaggaagagtttgagcaatcgtcagcagtttttgtaa
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integrated database retrieval system
