KEGG   Solanum lycopersicum (tomato): 101259124
Entry
101259124         CDS       T02665                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101259124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sly03019]
    101259124
   03041 Spliceosome [BR:sly03041]
    101259124
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101259124
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101259124
Spliceosome [BR:sly03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    101259124
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt Cut8
Other DBs
NCBI-GeneID: 101259124
NCBI-ProteinID: XP_004251889
LinkDB
Position
12:complement(5613872..5617071)
AA seq 440 aa
MDQMKKRKLEDNGVGTDVPVANRLSIEDGRKILESVTPEQMVEILQNAVVRHPDVLDQVR
EIVDRDPTKRKLFVRGLGWETTTEKIRSIFGTFGELEEAVVILDKNTGKSKGYGFVTFKH
VDGALLALKQPSKHVDGRVTVTQLASAGIQGGPGGGSSNNPVDVSLRKIYVSNVPYDMQS
ERILQHFLMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCK
LAIDGKKKPGVGGPGGAQVQTDGHGDPMGPGQYGAPSGYGGFSGHSSYGGHGHGPNSALG
SGNGIGVGGPGGSSYGNQSVGGGYGSGIGGPYGGGSHYGGAGSAGYGGLTGSGYGGAGAV
GGAAGGLPGAGSTLGGAGRGSSMYGLPPSSAGMPSGDYPPQGSHYGPLHQPHGLQNQGPG
ASAAPRVAPGGMYQGMHSYY
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggaccagatgaagaagaggaagcttgaggacaacggcgtcggcactgacgttcctgtt
gcgaataggctttcgatcgaagatggtcggaagattcttgaatctgttacacctgaacaa
atggtagaaatcttacaaaatgctgtcgttcgtcatcccgacgtgcttgatcaagttcga
gaaatcgtcgatcgtgaccctactaaaagaaagctttttgttcgtgggcttggctgggaa
actacgactgaaaaaatcaggtcaatttttgggacattcggtgagttagaagaagctgtt
gttattcttgataaaaatactgggaagagcaaaggttatggatttgttacgtttaagcat
gttgatggagctttacttgcgttaaagcaaccgagtaaacacgttgatggccgagttacg
gttactcagcttgcttcagctgggattcaaggtggccctggtggtgggagttcgaataat
ccagtggatgtgtcgttgaggaagatttatgtatctaatgtgccgtatgatatgcaatcc
gagaggattttacagcattttttgatgtatggggagatagaggaaggaccgttagggttt
gataaggccactgggaagtcaaaagggtatgctttgtttgtgtacaagacggcggaggca
gcacagtcttcgttggtggatcctgttaagaatattgatgggcatcaattgaactgtaag
ctggctattgatgggaagaaaaagcctggtgtaggaggtccaggaggagctcaggttcaa
acagatggacatggtgatccgatgggtcctgggcaatatggtgcgcctagtggttatggt
ggattttcaggtcattcttcatatggcgggcatggacatggtcccaattcggcattgggt
agtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtg
ggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtgga
gctggttcagctggatatggcgggttgaccggtagtggttatggcggtgctggggcagtg
ggaggtgctgctggtggattacctggcgctggtagtacattaggtggtgctggccgtgga
tcttcaatgtatgggttacccccaagctcagccgggatgccctcgggagattatccacca
cagggttctcattacggtcctttacatcaacctcacgggctacaaaaccaaggccctggg
gcatcagctgcacctagagttgcacctgggggtatgtaccaggggatgcattcatattac
tga

DBGET integrated database retrieval system