Solanum lycopersicum (tomato): 101259158
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Entry
101259158 CDS
T02665
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04142
Lysosome
sly04144
Endocytosis
sly05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101259158
04142 Lysosome
101259158
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101259158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101259158
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101259158
Membrane trafficking [BR:
sly04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101259158
Exosome [BR:
sly04147
]
Exosomal proteins
Proteins found in most exosomes
101259158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
IcmW
Totivirus_coat
Motif
Other DBs
NCBI-GeneID:
101259158
NCBI-ProteinID:
XP_004239947
LinkDB
All DBs
Position
5:complement(65987411..66006683)
Genome browser
AA seq
1706 aa
AA seq
DB search
MAAANAPITMKEALTLQSIGVNPQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNTRILALKAQVPGTTQDHLQIFNIEAKQKIKSHQMPEQVVFWKWI
TPKMLGLVTQTSVYHWPIEGDSEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFASIRVPGNDRDSILISFASKTSNAGQVTS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSIGGFYAVNRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQDLFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTVSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGIDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLVPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDSIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIHAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLPNVGDRLYDGALYEAAKIIFAFISNWAKLASTLIKLNQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEFYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIEL
HDSFDQIGLAQKIEKHELLEMRRVAASIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFATCLFVCYDLIRADVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQKEAKAKENEEKDVMKQQNMYAQLLPLALPAPPMPGMGGAGMGGGF
APPPPQMGGMGMPPMPPFGMPPMGSY
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctaatgctccgatcactatgaaagaggccctaacgttgcaaagtataggg
gttaatccgcagttcatcacgttcaccaatgttaccatggaatcagataagtatatatgt
gtacgggagacttcaccacaaaatagtgtggtgattattgatatgaacatgccaatgcag
cctttgaggcgcccaattacggcagactctgctcttatgaatcctaataccagaattctg
gctctaaaagctcaagttccaggaactactcaagaccacttacaaattttcaatattgag
gcaaagcagaaaattaaatcacatcagatgcctgagcaggttgttttctggaagtggatt
acccctaagatgttaggtctcgtcacacaaacctcagtgtaccattggccaattgaaggt
gattccgagcctgtaaagatgtttgatagaacagccaatctagctaacaaccaaattatc
aactatcgatgtgatccttcagagaaatggttggttttgattggtattgccccaggttcg
ccagagaagccccaactggtcaaagggaatatgcaactattttcagtggatcagcaacgc
agtcaagctcttgaggctcatgctgcgtcatttgcctcaataagagtacctgggaatgat
agggattccatactcatttcttttgcctcgaaaacttcaaatgctgggcaggttacatca
aagttgcatgtcattgagctaggcgcccagccagggaagccttcattttcaaagaaacag
gcagatcttttctttcctccggattttgctgatgatttcccagttgccatgcagatctct
cataagtatggtttaatttatgtcatcacaaagcttggtcttctgtttgtctatgacttg
gaaacagctactgctgtgtacagaaataggatcagcccagatcctatttttctgacttca
gaagcttcatcaatcggtggtttctatgccgtcaacaggcgagggcaagtgttgctagcc
acagtaaatgaagcaacaattattccttttatcagtggccaattgaataatctagagctt
gctgtcaatcttgccaaaagaggaaaccttcctggtgctgagaatttggttgtccagcgc
tttcaagatttgtttgctcaaaccaagtacaaagaggctgctgagcttgctgcagaatcc
ccccaaggcatactccgtacaccggatactgttgctaaatttcagagtgttcctgttcaa
gcagggcaaacacctcctctgttgcagtactttggtacactcttgactaaagggaagctc
aatgcattcgagtctttggaactttcacgacttgttgtcaaccagaataagaagaacctc
ttagagaattggttggctgaagataagctagagtgtagtgaggaacttggcgaccttgtg
aagactgttgataatgaccttgccttgaagatctacatcaaagcaagagcaacaccaaaa
gttgttgccgcttttgctgagcgcagggagtttgacaagattctgatatactcaaagcag
gttggatatactcctgactatttgttcctgctgcaaacaattcttcgatccgatcctcag
ggtgctgttaattttgcactcatgatgtctcaaatggagggagggtgtcctgttgattac
aatacaatcaccgacctatttcttcagaggaacatgatccgtgaggcaacagcatttttg
ttggatgttctgaagcctaaccttccagagcatggttacctgcagactaaggtcttggaa
atcaaccttgtgactttcccaaatgttgctgatgctatattagccaatggaatgttcagt
cattatgatcgaccacgaattgctcagctttgtgaaaaagctggtctttatattcgggct
ttgcagcactacagtgaactacctgatatcaagcgcgtaattgttaatacacatgccatt
gagcctcaggctctggttgagttctttgggactgtctcacgtgaatgggcgcttgagtgc
atgaaggaccttctggtgatcaatatcaaaggcaaccttcaaataatagttcaggttgca
aaggagtactgtgagcagttgggtattgatgcctgcattaagctttttgagcagttcaag
tcgtacgatgggttgtacttcttcttgggatcatatttgagttcgagtgaggatcctgat
atccactttaagtatatcgaagcagctgccaggactggacaaatcaaggaggttgagcgc
gtgacaagagaatctaacttctacgaccctgaaaagacaaagaacttcttgatggaagcc
aaacttcctgatgcccgacctctgatcaatgtttgcgaccgctttggttttgttcctgat
ctcacacactatctgtacactaacaatatgctacgatatattgagggttatgttcaaaag
gtcaatccaggaaatgctcctttagttgtggggcagcttttagatgacgagtgtccagag
gatttcattaaaggcttgatcctttctgttcgttctctgcttcctgttgagccccttgtg
gctgaatgtgaaaaaaggaaccgactgcgactgcttacacagtttttggagcatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctcttggtaagatcatcatagagagc
aataataacccagagcatttcctcacgaccaacccatattatgactctcgtgttgtgggt
aaatattgtgagaagcgtgatccgactcttgctgttgtggcctatagaagagggcaatgt
gatgatgaacttattaatgtaacaaataagaactctctgttcaaacttcaagccaggtat
gtcgttgagaggatggatggtgatctttgggataaagttcttgtccctgagaatgagttt
agaaggcagctcatagatcaagttgtctccactgctctgcctgaaagcaagagtccagaa
caagtttctgcagctgttaaagcgttcatgacagctgatcttcctcatgaactgattgag
cttcttgaaaagattgtgctccaaaactctgcatttagtgggaactttaatctgcagaat
ttgcttatcttgacagccattaaagctgatccatctagagttatggactatatcaatagg
cttgataattttgatggtcctgcggttggggaggttgctgttgaagcacagctctatgaa
gaagcttttgcgatcttcaagaagttcaacttgaatgttcaggctgtcaatgttctgctt
gacagcatccgtgatataaatcgtgctgtggagtttgcattccgagttgaagaagatgct
gtttggagccaggttgccaaagctcaactcagagagggattagtgagtgatgctattgaa
tcatttattcgggcagatgatgctacccaattcttggatgtcattcatgctgcagaagat
gcagatgtttatcatgacttagtgaagtatttgctgatggtaaggcaaaagactaaggaa
cccaaggttgacagtgaactcatttatgcttatgctaagattgatcgattgggcgaaatt
gaagaattcattttaatgccaaatgttgctaatctaccaaatgttggtgatcgcttgtat
gatggagcgttgtatgaggctgcaaagatcatatttgcttttatttctaattgggctaag
ttggcaagcactcttataaagttgaatcaattccaaggtgctgttgatgcagcccgtaaa
gcgaacagtgcaaaaacatggaaagaagtctgctttgcttgtgttgatgctgaggagttc
cgcttagctcaaatttgtgggcttaacattatagtgcaggtagatgatttggaggaagtg
agtgaattttaccaaaacagaggatgtttcaatgaattaatctctcttatggagagtggg
cttgggttggagcgcgcccatatgggtatctttacagaacttggtgttctatatgccaga
taccgtcatgagaagctcatggagcacataaaattattctccacccgtctcaacattcca
aaacttattcgtgcctgtgatgagcagcaacactggaaggaactcacgtatttgtatatc
caatatgatgaatttgataatgctgccactactgttatgaatcattctccagatgcttgg
gatcatatgcagttcaaagatatagttgtgaaagttgctaatgtggaactttattacaag
gccgtccacttctatttgcaagagcatcctgatctgatcaatgatcttttaaatgttcta
gcactcagggtggaccacacacgtgtagtggatataatgagaaaggcgggtcaccttcgc
ctagtgaagccttatatgattgctgttcaaagcaacaatgtttctgctgtgaatgaggcc
cttaacgagatatatgttgaagaggaagactatgatagactacgtgaatcaattgaattg
catgatagctttgatcagattgggcttgcacagaagatagagaaacatgagctccttgag
atgaggcgtgttgctgcttctatttataaaaaggctggtcggtggaagcaatccattgct
ctatcgaagaaagataatctttacaaagatgcaatggaaacagcctcacaatctggggat
cgtgaacttgctgaggagttgcttgtttacttcattgaacagggaaagaaagaatgcttt
gcaacatgcctatttgtttgttatgatttgatccgcgcagatgttgcccttgagctagca
tggatgaacaatatgatcgacttcgcattcccttatctattacagtttatccgtgaatac
actggcaaggtagatgagctgataaaagataagattgaggctcaaaaagaagcaaaagcc
aaagagaatgaagagaaggatgttatgaagcagcagaatatgtatgctcagctgcttcct
ctggctttgcctgctccgccaatgccaggtatgggaggtgctggtatgggtggaggtttt
gctccgccaccacctcaaatgggtggaatgggaatgcctccgatgcctccatttggcatg
ccaccaatgggttcctactaa
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