KEGG   Solanum lycopersicum (tomato): 101259158
Entry
101259158         CDS       T02665                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04142  Lysosome
sly04144  Endocytosis
sly05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:sly00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101259158
   04142 Lysosome
    101259158
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    101259158
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sly04131]
    101259158
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sly04147]
    101259158
Membrane trafficking [BR:sly04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    101259158
Exosome [BR:sly04147]
 Exosomal proteins
  Proteins found in most exosomes
   101259158
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_COPA_B IcmW Totivirus_coat
Other DBs
NCBI-GeneID: 101259158
NCBI-ProteinID: XP_004239947
LinkDB
Position
5:complement(65987411..66006683)
AA seq 1706 aa
MAAANAPITMKEALTLQSIGVNPQFITFTNVTMESDKYICVRETSPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNTRILALKAQVPGTTQDHLQIFNIEAKQKIKSHQMPEQVVFWKWI
TPKMLGLVTQTSVYHWPIEGDSEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PEKPQLVKGNMQLFSVDQQRSQALEAHAASFASIRVPGNDRDSILISFASKTSNAGQVTS
KLHVIELGAQPGKPSFSKKQADLFFPPDFADDFPVAMQISHKYGLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEASSIGGFYAVNRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQDLFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYIRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTVSREWALECMKDLLVINIKGNLQIIVQVAKEYCEQLGIDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVAECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIES
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLVPENEFRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDSIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIHAAEDADVYHDLVKYLLMVRQKTKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLPNVGDRLYDGALYEAAKIIFAFISNWAKLASTLIKLNQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEFYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTVMNHSPDAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRVDHTRVVDIMRKAGHLRLVKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIEL
HDSFDQIGLAQKIEKHELLEMRRVAASIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIEQGKKECFATCLFVCYDLIRADVALELAWMNNMIDFAFPYLLQFIREY
TGKVDELIKDKIEAQKEAKAKENEEKDVMKQQNMYAQLLPLALPAPPMPGMGGAGMGGGF
APPPPQMGGMGMPPMPPFGMPPMGSY
NT seq 5121 nt   +upstreamnt  +downstreamnt
atggcggcagctaatgctccgatcactatgaaagaggccctaacgttgcaaagtataggg
gttaatccgcagttcatcacgttcaccaatgttaccatggaatcagataagtatatatgt
gtacgggagacttcaccacaaaatagtgtggtgattattgatatgaacatgccaatgcag
cctttgaggcgcccaattacggcagactctgctcttatgaatcctaataccagaattctg
gctctaaaagctcaagttccaggaactactcaagaccacttacaaattttcaatattgag
gcaaagcagaaaattaaatcacatcagatgcctgagcaggttgttttctggaagtggatt
acccctaagatgttaggtctcgtcacacaaacctcagtgtaccattggccaattgaaggt
gattccgagcctgtaaagatgtttgatagaacagccaatctagctaacaaccaaattatc
aactatcgatgtgatccttcagagaaatggttggttttgattggtattgccccaggttcg
ccagagaagccccaactggtcaaagggaatatgcaactattttcagtggatcagcaacgc
agtcaagctcttgaggctcatgctgcgtcatttgcctcaataagagtacctgggaatgat
agggattccatactcatttcttttgcctcgaaaacttcaaatgctgggcaggttacatca
aagttgcatgtcattgagctaggcgcccagccagggaagccttcattttcaaagaaacag
gcagatcttttctttcctccggattttgctgatgatttcccagttgccatgcagatctct
cataagtatggtttaatttatgtcatcacaaagcttggtcttctgtttgtctatgacttg
gaaacagctactgctgtgtacagaaataggatcagcccagatcctatttttctgacttca
gaagcttcatcaatcggtggtttctatgccgtcaacaggcgagggcaagtgttgctagcc
acagtaaatgaagcaacaattattccttttatcagtggccaattgaataatctagagctt
gctgtcaatcttgccaaaagaggaaaccttcctggtgctgagaatttggttgtccagcgc
tttcaagatttgtttgctcaaaccaagtacaaagaggctgctgagcttgctgcagaatcc
ccccaaggcatactccgtacaccggatactgttgctaaatttcagagtgttcctgttcaa
gcagggcaaacacctcctctgttgcagtactttggtacactcttgactaaagggaagctc
aatgcattcgagtctttggaactttcacgacttgttgtcaaccagaataagaagaacctc
ttagagaattggttggctgaagataagctagagtgtagtgaggaacttggcgaccttgtg
aagactgttgataatgaccttgccttgaagatctacatcaaagcaagagcaacaccaaaa
gttgttgccgcttttgctgagcgcagggagtttgacaagattctgatatactcaaagcag
gttggatatactcctgactatttgttcctgctgcaaacaattcttcgatccgatcctcag
ggtgctgttaattttgcactcatgatgtctcaaatggagggagggtgtcctgttgattac
aatacaatcaccgacctatttcttcagaggaacatgatccgtgaggcaacagcatttttg
ttggatgttctgaagcctaaccttccagagcatggttacctgcagactaaggtcttggaa
atcaaccttgtgactttcccaaatgttgctgatgctatattagccaatggaatgttcagt
cattatgatcgaccacgaattgctcagctttgtgaaaaagctggtctttatattcgggct
ttgcagcactacagtgaactacctgatatcaagcgcgtaattgttaatacacatgccatt
gagcctcaggctctggttgagttctttgggactgtctcacgtgaatgggcgcttgagtgc
atgaaggaccttctggtgatcaatatcaaaggcaaccttcaaataatagttcaggttgca
aaggagtactgtgagcagttgggtattgatgcctgcattaagctttttgagcagttcaag
tcgtacgatgggttgtacttcttcttgggatcatatttgagttcgagtgaggatcctgat
atccactttaagtatatcgaagcagctgccaggactggacaaatcaaggaggttgagcgc
gtgacaagagaatctaacttctacgaccctgaaaagacaaagaacttcttgatggaagcc
aaacttcctgatgcccgacctctgatcaatgtttgcgaccgctttggttttgttcctgat
ctcacacactatctgtacactaacaatatgctacgatatattgagggttatgttcaaaag
gtcaatccaggaaatgctcctttagttgtggggcagcttttagatgacgagtgtccagag
gatttcattaaaggcttgatcctttctgttcgttctctgcttcctgttgagccccttgtg
gctgaatgtgaaaaaaggaaccgactgcgactgcttacacagtttttggagcatcttgtg
agtgaaggaagccaagatgtgcatgtacacaatgctcttggtaagatcatcatagagagc
aataataacccagagcatttcctcacgaccaacccatattatgactctcgtgttgtgggt
aaatattgtgagaagcgtgatccgactcttgctgttgtggcctatagaagagggcaatgt
gatgatgaacttattaatgtaacaaataagaactctctgttcaaacttcaagccaggtat
gtcgttgagaggatggatggtgatctttgggataaagttcttgtccctgagaatgagttt
agaaggcagctcatagatcaagttgtctccactgctctgcctgaaagcaagagtccagaa
caagtttctgcagctgttaaagcgttcatgacagctgatcttcctcatgaactgattgag
cttcttgaaaagattgtgctccaaaactctgcatttagtgggaactttaatctgcagaat
ttgcttatcttgacagccattaaagctgatccatctagagttatggactatatcaatagg
cttgataattttgatggtcctgcggttggggaggttgctgttgaagcacagctctatgaa
gaagcttttgcgatcttcaagaagttcaacttgaatgttcaggctgtcaatgttctgctt
gacagcatccgtgatataaatcgtgctgtggagtttgcattccgagttgaagaagatgct
gtttggagccaggttgccaaagctcaactcagagagggattagtgagtgatgctattgaa
tcatttattcgggcagatgatgctacccaattcttggatgtcattcatgctgcagaagat
gcagatgtttatcatgacttagtgaagtatttgctgatggtaaggcaaaagactaaggaa
cccaaggttgacagtgaactcatttatgcttatgctaagattgatcgattgggcgaaatt
gaagaattcattttaatgccaaatgttgctaatctaccaaatgttggtgatcgcttgtat
gatggagcgttgtatgaggctgcaaagatcatatttgcttttatttctaattgggctaag
ttggcaagcactcttataaagttgaatcaattccaaggtgctgttgatgcagcccgtaaa
gcgaacagtgcaaaaacatggaaagaagtctgctttgcttgtgttgatgctgaggagttc
cgcttagctcaaatttgtgggcttaacattatagtgcaggtagatgatttggaggaagtg
agtgaattttaccaaaacagaggatgtttcaatgaattaatctctcttatggagagtggg
cttgggttggagcgcgcccatatgggtatctttacagaacttggtgttctatatgccaga
taccgtcatgagaagctcatggagcacataaaattattctccacccgtctcaacattcca
aaacttattcgtgcctgtgatgagcagcaacactggaaggaactcacgtatttgtatatc
caatatgatgaatttgataatgctgccactactgttatgaatcattctccagatgcttgg
gatcatatgcagttcaaagatatagttgtgaaagttgctaatgtggaactttattacaag
gccgtccacttctatttgcaagagcatcctgatctgatcaatgatcttttaaatgttcta
gcactcagggtggaccacacacgtgtagtggatataatgagaaaggcgggtcaccttcgc
ctagtgaagccttatatgattgctgttcaaagcaacaatgtttctgctgtgaatgaggcc
cttaacgagatatatgttgaagaggaagactatgatagactacgtgaatcaattgaattg
catgatagctttgatcagattgggcttgcacagaagatagagaaacatgagctccttgag
atgaggcgtgttgctgcttctatttataaaaaggctggtcggtggaagcaatccattgct
ctatcgaagaaagataatctttacaaagatgcaatggaaacagcctcacaatctggggat
cgtgaacttgctgaggagttgcttgtttacttcattgaacagggaaagaaagaatgcttt
gcaacatgcctatttgtttgttatgatttgatccgcgcagatgttgcccttgagctagca
tggatgaacaatatgatcgacttcgcattcccttatctattacagtttatccgtgaatac
actggcaaggtagatgagctgataaaagataagattgaggctcaaaaagaagcaaaagcc
aaagagaatgaagagaaggatgttatgaagcagcagaatatgtatgctcagctgcttcct
ctggctttgcctgctccgccaatgccaggtatgggaggtgctggtatgggtggaggtttt
gctccgccaccacctcaaatgggtggaatgggaatgcctccgatgcctccatttggcatg
ccaccaatgggttcctactaa

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