Solanum lycopersicum (tomato): 101259176
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Entry
101259176 CDS
T02665
Name
(RefSeq) long chain acyl-CoA synthetase 4-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00061
Fatty acid biosynthesis
sly00071
Fatty acid degradation
sly01100
Metabolic pathways
sly01212
Fatty acid metabolism
sly04146
Peroxisome
Module
sly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101259176
00071 Fatty acid degradation
101259176
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101259176
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sly01004
]
101259176
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101259176
Enzymes [BR:
sly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101259176
Lipid biosynthesis proteins [BR:
sly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101259176
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of breast milk
101259176
Exosomal proteins of breast cancer cells
101259176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
EIAV_GP90
Trypsin_2
Motif
Other DBs
NCBI-GeneID:
101259176
NCBI-ProteinID:
XP_004244632
LinkDB
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Position
8:complement(3511764..3524788)
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AA seq
657 aa
AA seq
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MAEKFIIEVEPAKPAKDGKPSVGPVYRSKFAKDGFPPPIEGLNSCWDIFRLSVEKYPNNR
MLGHRKIVDGKPGKYVWKTYKEVYDIVIKVGNSIRNCGVEKGGKCGIFGANCAEWIISME
ACNAHGLYCVPLYDTLGAGAVEFIISHAEVAIAFVEEKKVPELLKTFPNAAKYLKTVVSF
GEVTPQQKEEIEKFGVSLYSWDEFLQVGSKNQYDLPLKEKTDICTIMYTSGTTGEPKGVM
ISNNSIVTLIAGVKRFLESVNEALTMSDVYLSYLPLAHIFDRAIEECFIRHGASIGFWRG
DVKLLTEDLGELKPTVFCAVPRVLDRIYSGLQQKISSGGRLRSTLFNIAYARKLQYLKDG
CKYHEASPISDKVVFSKVRDGLGGKVRLILSGAAPLSSHVEAFLRVVACAHVLQGYGLTE
TCAGTFVSLPNQFDMLGTVGPPVPNVDVCLVSVPEMEYDALSSTPRGEICVRGDTLFSGY
YKREDLTKEVLIDGWFHTGDIGEWQPNGSLKIIDRMKNIFKLSQGEYVAVENLENVFGNN
PVIESVWVYGSSFESFLVAVVNPSKQQVEKWAKQNSLSGDFNSLCENSKVKEHILGELTK
VGKEKKLKGFEFIKALHLDPVPFDMERDLLTPTFKKKRPQLLKYYKDVIDTMYKDAK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaattcatcatcgaagtggagccggcgaagccagcgaaagatggaaagccg
tcagtcggaccggtttatcggagtaaattcgcgaaagacggttttccaccgccgattgaa
ggcttaaacagctgttgggatattttccgtttgtcagtggagaaatatccaaacaaccga
atgcttggccaccgtaagattgtggatgggaagcctgggaagtatgtgtggaagacttac
aaagaagtgtatgacattgtcataaaagtagggaactccatccgaaattgtggtgtagaa
aaaggagggaaatgtggtattttcggtgccaattgtgctgagtggattatcagcatggag
gcatgcaatgctcatggactttactgtgtccctctgtacgacaccttgggtgctggtgca
gtggaatttatcatttcccatgcagaagttgcaattgcttttgttgaggagaaaaaagtt
cccgagcttttgaaaacatttccaaatgctgcaaagtacttgaagacggttgtgagtttt
ggggaagtgactcctcaacaaaaggaggagatcgaaaagtttggagtgtctctttattcc
tgggatgagtttctgcaagtaggaagcaaaaatcagtatgatcttccactgaaggagaag
actgatatctgtacaataatgtataccagtggaacaaccggagaacccaagggtgtgatg
atctcaaataatagcattgttactcttatagctggagtgaagcggtttcttgagagtgta
aatgaggcgctgacaatgagtgatgtatatctctcatatctccccttggcacatatcttt
gatcgggcgattgaagaatgtttcattagacatggcgcctcaataggattttggcgaggg
gatgtcaaattactaactgaagaccttggagagctgaaaccaactgtcttctgtgcggta
cctcgggtattagacagaatatattcaggtttgcaacagaaaatttcttcagggggtcgg
ctaagaagcacgttgttcaatattgcatatgctcgaaaacttcaatatttgaaggatggg
tgtaaatatcacgaagcatctccaatatctgacaaagttgtttttagtaaggtaagagat
ggtctaggaggaaaagtacgtcttatattatctggagcagcacccctctcttctcatgta
gaagcttttctgcgagttgtagcatgtgctcatgttcttcagggatatggtcttactgaa
acatgtgctggtacatttgtatcactacctaaccagtttgatatgcttggtacggttggt
cctccggtgcccaatgtggatgtgtgcttggtgtccgttcctgaaatggaatatgatgct
ctttcaagcacaccacgtggagaaatatgtgtgaggggagacactctgttttctggttat
tacaagcgtgaggatctgacaaaagaagtcttgattgatggatggttccatacaggggat
attggtgagtggcaaccaaatggtagcttgaagataattgatcgcatgaagaatattttc
aagctatcacaaggagaatatgttgcagtcgaaaatttggagaatgtatttggcaataat
cctgttattgaatcggtatgggtatatgggagcagctttgagtctttccttgttgctgtt
gttaatccaagtaaacaacaggttgaaaaatgggccaaacagaatagcctctcaggggat
tttaattccctctgtgaaaattcaaaggtgaaagagcacatattaggggagctcacaaaa
gttggaaaagaaaagaagctgaagggatttgagttcataaaagctctacaccttgatcca
gttccatttgacatggaacgtgacctcctgactccaacatttaagaagaaaagaccacaa
ttgcttaaatactacaaggacgtgattgacaccatgtacaaggatgctaaatga
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