Solanum lycopersicum (tomato): 101259296
Help
Entry
101259296 CDS
T02665
Name
(RefSeq) zinc finger transcription factor 57
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101259296
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101259296
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101259296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_3
zf-RING_2
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-CCCH_9
zf-RING_UBOX
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101259296
NCBI-ProteinID:
NP_001307876
LinkDB
All DBs
Position
10:17273498..17288426
Genome browser
AA seq
360 aa
AA seq
DB search
MSERVLCKFFAHGACLKGDHCEFSHDWNNPSNNVCTYYQKGACAYGSRCRYDHVKLSRSQ
PSAQSSAQPQQCLLSSSTPINVSPGMGAHNADVLPGICTEYLASSRPYDASSQSAWNQKS
ELQDALEIDDMIELNSDNPADRSICAFAAAGNCPRGEKCPRVHGDLCPTCGKHCLHPFRP
EEREEHIKTCENKQKHLDLLKRSQEIECSVCLERVLSKSTAAERKFGILSECDHPFCVSC
IRNWRGSSSSGMDVNSALRACPICRKLSYFVIPSVIWYFTKEEKEEIVDNYKNKLRSIDC
KHFDFGNGTCPFGTSCFYKHQHRDGRVEEVVLRHLGSEDGSTVIAKNIRLSDFLRNFEIR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagggttctttgcaagttctttgcacatggggcatgtctgaagggggatcat
tgtgagttttcacatgattggaacaatccttctaataatgtatgtacctactaccaaaaa
ggagcttgtgcttatggaagcaggtgtagatatgatcatgttaaactgtctcgatcacaa
ccttcagctcagtcttcagcacaacctcaacaatgtctgctttcaagttctacgcctatc
aatgtgtctcctggaatgggtgcacataatgcagatgttctgccaggcatttgtactgag
tatttagcttcaagcagaccttatgacgcttccagccaatcagcatggaaccaaaagtca
gagcttcaagatgcattagagattgatgacatgattgagttaaacagtgataatccagct
gatcggtcaatctgtgcttttgctgctgctggtaattgtcctcggggagaaaagtgtcct
cgtgttcatggagatctgtgtccaacctgcggaaagcattgcttgcatcctttcaggccc
gaggaaagagaggagcatataaaaacatgtgagaacaagcaaaagcaccttgatttattg
aagcgcagtcaagaaatagaatgcagtgtatgccttgaacgcgttctttccaagtcaaca
gcagctgagaggaagtttgggatcctttctgagtgtgatcatccattttgtgtatcgtgt
ataaggaattggcgtggcagttcttcctctgggatggatgttaattctgcactgagggcg
tgtcccatatgcagaaagctttcatattttgtcattccaagtgttatttggtacttcaca
aaagaagagaaggaagaaatagttgacaactacaaaaacaaactcagatctattgattgc
aagcactttgactttgggaatgggacttgtccatttgggactagctgtttctacaagcat
caacaccgtgatggtcgtgtggaggaagtggtactacgccatcttggctctgaagatgga
agcacagtaatcgctaaaaatatcaggctctcggacttccttaggaatttcgaaattagg
tga
DBGET
integrated database retrieval system
