Solanum lycopersicum (tomato): 101259306
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Entry
101259306 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K11790
denticleless
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101259306
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101259306
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
MIOS_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_WDR11_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
101259306
NCBI-ProteinID:
XP_004232325
UniProt:
A0A3Q7FVS3
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Position
2:65443186..65448543
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AA seq
514 aa
AA seq
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MDAFKHQSFFQDIKSREVHGYRVKRRPYISHELSNFNQIGAVAVDHSGFTPPPMALSFCK
TSKNSHIVAVTDEGGYLSLFNTRLQFPSSFTHLQNAEKAKVSEWVAHDNAIFDVCWIKED
TNILTASGDQSIKVWDAQAKQCVRVLAGHTGSVKSICPHPSNHDIIVSGSRDGTFALWDL
RCSDSSSENLFIPSIATVHEAHISPCQRRTRRGKASSVSITSILYLKDELSIASAGAVDS
VIKFWDTRNLKCPVVQACPHPDVSTQKVQRYHGVSSLSQDLNGAFISASCMDSRIYLYNV
LQAEKGPVKTFKGCKIESFFVKAAISPDAAHILSGSSDGNGYLWQVNKPLEDPIMLKGHD
GEVTALDWCTSETGKVATSSDDFTVRFWNIHNSCYSNTRSPSSIRRRVTALSCMQRRKLF
SDEKPASIKNVSAVCDSNLICHQDLPDPITVPEMSTPISKKRKTLPSVEPQENFEKTPEA
AKRSPSSVLNPPSSLRKTIRDYFLVTPPSGLHSK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgttcaagcatcagtcgttcttccaagatatcaaatcaagggaggttcatgga
tacagagtgaaaagacgaccttacattagtcacgaattgtctaatttcaatcaaattgga
gccgtagcagttgaccacagcgggttcacgccacctccaatggccctatctttctgcaag
acaagtaaaaactcacatattgttgctgtcactgacgagggtggctaccttagcttgttt
aacacccggttgcaatttccttcttcttttactcacctacaaaacgcagaaaaagctaag
gtatcagaatgggttgctcatgataatgccatatttgatgtatgttggatcaaggaagat
accaatatcttaacagcttcaggtgatcaaagtataaaggtatgggatgcacaagcaaag
caatgtgtgagagtactagcgggtcacactgggagtgtaaaatccatttgtcctcatcct
tcaaatcatgatattattgtttctggttcaagagatgggacatttgcactctgggacttg
aggtgctccgacagtagcagtgaaaaccttttcataccgtcaattgctaccgtccatgag
gctcacatttctccctgtcagaggcggactagacgtggaaaggcttcctctgtgagcatt
acatctatactttaccttaaagatgagctttccatagctagtgctggagcagttgacagt
gtcataaagttctgggataccaggaatctcaaatgtcctgttgttcaggcatgccctcat
cctgatgtatcaactcagaaggtacaacgatatcatggagtatctagtttgtctcaagat
ttaaatggagcatttatttctgcatcatgcatggacagcagaatctacctctacaatgta
cttcaggcagaaaaagggcctgttaaaactttcaaaggatgcaaaatagaatcatttttt
gtcaaggcagcaataagtcctgatgcagctcatattcttagtggttccagtgatggaaat
ggctacttatggcaggtaaacaaacctcttgaagatccaattatgttgaaaggccatgat
ggagaagttacagcactcgattggtgcacatcagaaacaggcaaagttgctacatcatcg
gatgatttcacggtgcggttttggaacatccacaacagttgttactcaaacactcgatct
ccatcatccattcgaaggagagtaacagcactttcatgtatgcaacgccggaagctattt
tcagatgaaaaaccagccagcatcaagaatgtctctgctgtctgtgactcaaacttgata
tgtcatcaagacttgcctgatcctatcacagtccctgaaatgagcactccaatatcaaag
aagagaaaaactttaccaagtgttgaacctcaagaaaactttgagaaaaccccagaagct
gcaaagagaagtccttcatctgttctgaatcccccttcctctttgaggaagacaatcaga
gattactttttagtcacccctccttcaggcttgcacagtaaatga
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