Solanum lycopersicum (tomato): 101259379
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Entry
101259379 CDS
T02665
Name
(RefSeq) probable CoA ligase CCL6
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00061
Fatty acid biosynthesis
sly00071
Fatty acid degradation
sly01100
Metabolic pathways
sly01212
Fatty acid metabolism
sly04146
Peroxisome
Module
sly_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101259379
00071 Fatty acid degradation
101259379
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101259379
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sly01004
]
101259379
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101259379
Enzymes [BR:
sly01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101259379
Lipid biosynthesis proteins [BR:
sly01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101259379
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of breast milk
101259379
Exosomal proteins of breast cancer cells
101259379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
101259379
NCBI-ProteinID:
XP_019067458
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Position
1:complement(92304085..92309158)
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AA seq
659 aa
AA seq
DB search
MSNYTVKVEETRPASDGKPSAGPVYRNIYAKDGLMEMPTRFESPWDFFSESVKKNPKNQM
LGRRQVVDKKAGPYSWLTYEEVYETTIKIGSAIRNRGVNPGDRCGIYGVNCPEWIMAMEA
CNSQAISYVPLYDSLGANAVEFIINHAEVSITFAQESKIPAILSCLSKCNSYLKTIVSFG
NISSTQRSEAEEQGVACFSWEEFVQMGSLDHELPQKRKTDISSIMYTSGTTGEPKGVILT
NGAFMGEVLSMDQLLVETDKEGTGEDVYFSFLPLAHIFDQIIETYCIYRGASIGFWQGDI
RYLIEDLLVLKPTIFCGVPRVYDRIYTGVMDKIEAGGTLKKLLFQFAYNYKLRNMEKGLR
QDEAAPRFDRLVFDKIKLAFGGRVRLMLSGAAPLPKHVEEFLRVTCCCSLSQGYGLTESC
GGCLTSIANVHSMTGTVGVPMTTIEARLESVPEMGYDALASVPRGEICLRGKTLFSGYHK
REDLTKSVLVDGWFHTGDIGEWQPDGAMKIIDRKKNIFKLSQGEYVAVENIEGVYSRCPL
VTSIWIYGNSFESFLVAVVVPERKALEEWASNNQETGDFSSLCNNTKARKYILDELNSTA
RKHQLRGFEMLRAVHLEPNPFDIERELVTPTFKLKRPQLLNYYKDIVDQLYKEAKAKTA
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaattatacagtgaaagttgaagaaacccggccagcttctgacggaaagccgtca
gcagggccagtttataggaatatttatgctaaagatggcctcatggaaatgcctactcgt
tttgagtcaccttgggacttctttagtgaatcagttaagaagaatcctaaaaatcaaatg
ctgggccgccgtcaggttgttgacaaaaaggcaggtccctacagttggctaacatatgag
gaggtttatgaaaccacaattaagattggttcagccatccgaaatcgtggtgttaatccg
ggagaccggtgtggcatctatggtgtgaactgtcctgagtggataatggctatggaggct
tgtaacagccaagcaatttcatatgtaccactctatgattctcttggtgcaaatgcagtt
gaatttatcatcaaccacgctgaagtttcaataacttttgcccaagaaagcaagatacct
gctatcttatcatgcttgtctaagtgcaattcttatctaaaaactatcgtcagctttgga
aacatctcaagcacacagagaagtgaagccgaggaacaaggagtagcttgcttctcatgg
gaagagtttgttcaaatgggaagtttggatcatgaacttcctcagaaaaggaaaactgat
atttcctcaattatgtacactagtggaactactggagaaccaaaaggtgtcattctgact
aatggtgctttcatgggagaagttctgtcgatggatcaacttctcgttgaaacagacaaa
gagggaacgggggaggatgtgtacttttcgttccttccacttgctcatatatttgatcaa
ataattgagacatattgcatatacagaggtgcttcaataggattttggcaaggcgacatt
agatacttgattgaagatcttctggtattaaaaccgactatattctgtggagttccacga
gtttatgaccgcatatacacaggggtgatggataaaatcgaagctggaggtacattgaag
aagctgctttttcagtttgcatacaactacaaattaaggaatatggagaaaggattgaga
caagatgaagcagctccgcgctttgacaggcttgtttttgataagatcaaactagcattt
ggtggacgagtacgtctgatgctttctggagctgctcctttgcccaagcacgttgaagaa
tttctaagggtaacatgttgctgttctttatcacaaggatatgggcttactgaaagttgt
ggaggatgtctcacatccatagccaatgtacactccatgacaggaactgttggtgttcca
atgactacaattgaggcaagacttgagtcagtgccagaaatgggatatgatgctcttgca
agcgtccctcgtggagaaatttgtctgaggggaaaaaccttgttttcggggtaccataaa
cgagaagatcttacaaaatctgtacttgtggatggatggtttcatacaggtgacattggt
gagtggcaaccagacggagcaatgaaaatcattgaccggaaaaagaatatattcaagctg
tcccaaggggagtatgtagctgtagaaaacattgaaggcgtatactccagatgccctctt
gttacatcaatttggatatatgggaacagttttgaatccttcctagtggctgtggtagtt
ccagaaagaaaggcacttgaagagtgggcctcgaataatcaagaaaccggagatttttca
tctctatgtaataacacaaaggcaagaaagtacatattggatgaactcaacagcactgct
aggaaacaccaacttcgaggctttgaaatgttacgtgcagttcatttggaaccaaatcca
tttgacattgagagagaattagttacccctacattcaaactcaaaagaccacaactgctc
aactattacaaggatattgtggatcaactatacaaagaagcaaaggcaaaaactgcataa
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