Solanum lycopersicum (tomato): 101259412
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Entry
101259412 CDS
T02665
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Module
sly_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101259412
Enzymes [BR:
sly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101259412
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
101259412
NCBI-ProteinID:
XP_019066921
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Position
12:complement(9827710..9829641)
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AA seq
396 aa
AA seq
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MYDFKTMKFTSVSCFLFFCLIILIIPSCLAYNVVNFGARGDGRTDSTSAFLRAWSSACHS
TSQPNVYIPRGTYLVRTLNLNGPCKRRVEFRIDGTLVAPVNYNAIGNAEFWIMFYKVSGV
NVYGGTINAKGHGYWSCRKGGKSCPQGARSIQFMWCNNVLLKGLTSLHSQRVHIGIGYSS
NVRVENLKITAPSGSPNTDGIHVQNSRGITIYDSIIKTGDDCISIGPASANMWIEKVGCG
PGHGISIGSLGHSLNEDGVANITVANSVFTKTQNGVRIKSWARPSGGFATNIMFRNLVMR
NVGNPIFIDQNYCPHNVCPRQSSGVKVSDVTFKNVKGTSSTQAAMKFDCSASNPCTGIKL
HDINLTYNDRLRRPAFAYCKNARGRHTGKVFPKSCI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacttcaaaactatgaaatttactagtgtttcttgttttctcttcttttgttta
attatactaattataccttcttgtttagcttacaatgtggttaattttggggctagggga
gatggcaggacggactcaacctccgcttttcttcgcgcttggtcttctgcctgccactct
actagccaacctaacgtgtatattccacgaggaacgtatttggtaaggacgttgaactta
aatggaccttgtaagagacgagttgagttccgaattgatggtactctcgttgcgccggtg
aattataatgcaattggaaatgctgagttttggattatgttttataaggtaagtggtgtt
aatgtgtatggtggaactattaatgcaaagggacatggttattggtcttgtagaaaaggt
ggaaagtcttgtccacaaggagctaggtcgatacaatttatgtggtgtaacaatgtactg
ttgaagggtttgacatcactacacagtcaaagagtacacattggaattggttacagcagc
aatgtcagagttgagaatcttaagataacagctccaagtggaagtccaaacaccgacgga
attcatgttcagaactcaagggggattactatttatgacagcattatcaagaccggagat
gattgtatatctattggccctgcctccgcgaatatgtggattgaaaaagttgggtgtggc
cctggacatggtatcagcattggaagtttgggacatagtttgaatgaagatggagtagca
aatatcacagtagcaaattctgttttcacaaagacacaaaatggggttaggataaaatca
tgggcaagaccaagtggtggctttgctacaaatatcatgtttagaaaccttgttatgagg
aatgttggaaatcccattttcattgaccaaaactattgccctcataatgtatgccctcgt
cagagttcaggagtgaaggtgagcgacgtaacattcaagaatgtgaagggaacatcatct
acacaagcagccatgaaatttgattgtagtgcttcaaatccgtgcaccggaataaaatta
catgacattaacttaacttacaatgatcgtttgagaaggccagcctttgcttactgtaaa
aacgcaaggggacgtcatactggcaaagtgtttcccaaaagttgcatatga
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