Solanum lycopersicum (tomato): 101259849
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Entry
101259849 CDS
T02665
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101259849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101259849
03029 Mitochondrial biogenesis [BR:
sly03029
]
101259849
Membrane trafficking [BR:
sly04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101259849
Atg1 complex
101259849
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101259849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101259849
NCBI-ProteinID:
XP_004241434
UniProt:
A0A3Q7HVB6
LinkDB
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Position
6:complement(47464713..47469893)
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AA seq
604 aa
AA seq
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MDFRSNLQGGYGRFEQILAQYLLKSLHIILNLRVPSIRAYGGFEEVKRSDKWFNMVLGDR
PAVFENLNLLHGEPMIIDIILVQDKDCTSLKHSSGKAFAGAYTETIIERWVVQCENRRSM
VPQMGDSSYKKMYKKSIILLRSVYSMLKLLPAFKAFRKLSSSSQSSCFDINFKVSSFSEP
FSRAEEEMMKQFTFTSVDAQQGRLSLSVTYRENLVDFNLESSASFPPEIITDYVGSPLTD
PLRSFPLNSTDKGVHNTSFPLRRTQSSCSAPVQRPQSWTSGLFRAPSLPQPYVGSPPLYH
APYELSTSVSNVYGQRIPPNYKYSTHQKTTSFDDDQLSPPFSSSPSPPTYLSGANLVQTH
LRSETDPVSIPHPLIGRTSRHLSPNLSDPNRHYLPPMSPRCTKHDSSSHESPSGIRSSRK
IDLLRVPESDTTNPGQKVPTDARDDSGRFSGVLSSSDSPRVGVSRSSSSRLSFQDDLDDF
DFSCPFIVDDVDTSVSRARENLESRKRPEASSRVSATTRKSQDAAVGALVHMLRTAPPLR
QDSTCYTTDSIEGEVEGETGTASQFYVPRKASDALEELKAYTELKDMLLPKSTTRSDSED
GSYA
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggattttcggagtaacttacagggtggatatggaagatttgagcaaatacttgctcaa
tatcttctaaaaagcttgcatattattttgaacttgagggttccttcgataagagcgtat
ggtgggtttgaagaagtgaagaggagtgacaagtggtttaatatggtgttgggagatcgt
cctgcggtttttgaaaacttgaatctgttgcatggggagccaatgataatagatataata
cttgttcaagataaagattgtacttcattgaagcacagttcaggtaaagcatttgcaggg
gcatatacagaaaccattatagagaggtgggtcgtgcaatgtgaaaatcggaggtctatg
gttcctcaaatgggtgattcctcttacaagaaaatgtacaagaagtctatcatactactt
cgttccgtttattcgatgttgaagctcctgcctgcattcaaggccttcaggaaactatct
tcgtcaagtcagagtagttgttttgatattaattttaaggtatcttcatttagcgagcca
ttctcaagggcagaggaggagatgatgaaacaatttacttttacttcagttgatgcccag
caaggccgtctttccttatctgtgacatatcgtgaaaatctggtggactttaacctggag
agttctgcatcctttccacctgagatcattacagattatgttggtagtccactcactgat
cctctgaggtcattccctttgaactcgacagataagggtgttcataatacttcatttcca
ttgagaaggacacagtcctcttgttcagcacctgttcagcgcccgcagagttggacaagt
ggtctcttcagggcaccttctttacctcagccatatgtaggatctccacctttgtaccat
gcaccatatgagctttcaacttcagtcagtaatgtatatggacagaggattccacctaac
tacaaatattcaactcaccagaaaacaactagttttgatgatgaccaactttcccctcca
ttttcatcatcaccatctccacccacatatctttcaggtgcaaatcttgtgcagactcat
ttgcgttcagaaactgatcctgtcagtatccctcatccattaataggcagaacttccaga
cacctatctcctaatttgtctgatccaaacaggcattatctcccacctatgtcacctaga
tgcacaaagcatgattcttcatcccatgaatccccttctggaatcagatcatcaaggaaa
atagatttgctaagggttccagagtcagatactactaatcctggacaaaaggtgcctaca
gatgctagagatgattcaggacggttctcaggtgtgctctcttcaagtgattcaccacgt
gttggagtttctagaagttctagcagcagattatcttttcaggatgacttggatgacttt
gatttttcctgtccttttatagttgatgatgttgatacttctgtttcccgagccagagag
aaccttgaatccagaaagcgcccagaagcctcgtctagagtatctgcaacaaccagaaaa
tctcaagatgctgctgtaggtgcccttgttcacatgttgagaactgctcctccgctgcgt
caagattctacttgctatactacagattctatagagggagaggtagagggggaaactggc
actgcatctcagttctatgttcctaggaaggcatcagatgcattggaggagctcaaagct
tatactgagttgaaagatatgttacttcccaagagcacgacccgctcagacagtgaggat
gggagctatgcgtga
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