Solanum lycopersicum (tomato): 101259991
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Entry
101259991 CDS
T02665
Name
(RefSeq) KH domain-containing protein At3g08620
KO
K14945
protein quaking
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101259991
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101259991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
STAR_dimer
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
101259991
NCBI-ProteinID:
XP_010327700
UniProt:
A0A3Q7IJF5
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All DBs
Position
10:57589046..57597606
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AA seq
282 aa
AA seq
DB search
MSGLYNHNFSPSRAASPQIRTNPDVESNQYLSELLSEHQKIGPFMQVLPICSTLLNQEIM
RVSGMMPNQGFGELDRFRHRSPSPMTSPNLMSNVGGTGLGGWSGLAQERLSGAPGMSMDW
HGAPASPSSYIMKRILRLEIPLETYPNFNFVGRLLGPRGNSLKQVEATTGCRVYIRGRGS
IKDPDQEENLRGIPGYEHLNEPLHILIEAELPANIVDIRLRRAQEIIEELLKPVDESQDY
IKRQQLHELAMLNSNLREESPGPSGSVSPFNSGGLKRPKTGR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttatataatcataacttttcaccttcaagagctgcatctcctcagattaga
actaatccagatgttgaaagtaatcagtatttatctgagttgttgtcggagcatcaaaag
attggtcctttcatgcaagttcttcctatatgtagcacactcttgaatcaagagatcatg
agggtttcaggaatgatgccaaaccaaggttttggtgagctagataggtttcggcataga
agtcccagccctatgacttcaccaaaccttatgtcaaatgttggcggaacaggactgggt
ggctggagtggacttgcgcaggagagattaagtggagctcctggaatgtcaatggactgg
cacggggcaccagcaagtcctagttcatacattatgaaaaggatattgcgcttagaaatt
ccattagaaacttacccaaatttcaattttgttgggcgacttctcggtcctaggggtaat
tccttgaaacaggtggaagctactacaggatgtcgtgtgtatattagaggaagagggtca
ataaaggatccggatcaggaggagaacctgcgtggaataccaggatatgagcacctgaat
gaaccactccacattttaattgaggcggaattacctgccaatatcgtggatattagattg
agacgggcacaagaaattatagaggagttgctcaagccagtggacgagtcacaggattat
ataaagagacaacaattgcatgaacttgccatgctaaattcaaatctcagagaagagagt
cccggaccaagtggcagtgtctctcctttcaatagtggtggattgaaacgtcccaagact
ggtcgttga
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