Solanum lycopersicum (tomato): 101260036
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Entry
101260036 CDS
T02665
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101260036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sly03036
]
101260036
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
101260036
INO80 complex (yeast)
101260036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
101260036
NCBI-ProteinID:
XP_004236584
UniProt:
A0A3Q7G0P2
LinkDB
All DBs
Position
4:complement(7821759..7838151)
Genome browser
AA seq
1539 aa
AA seq
DB search
MDPKKQYSYSNLFNLESLINFQLPQLDDDFDYHGNSSQDESRGSPGGTAGNQINGTMSGR
ELKKKRRTSYSSDEDGDRDRAHTTYISEEKYRTMLGEHVQKYKRRLGNSSASPAAIRNGV
PVMRGGGGSKDQKSANDHRGGAVRLASTSEFFNNSTQSLGNHIQSDFLGPYGGDRSIYEP
AFLDLGEDITYKIPPPYEKLALSLNLPTMSDIQVNEIYLKGTLDLETLAAMMASDKKLGT
KRQAGMGDPKPQFESLQARLRAQPTNNAGQRFSLLVSEAALEASSMPEGAAGGIRRCILS
DGGVLQVYYVKVLEKGDTYEIIERSLPKKPKLEKDPFAIEKEEMERIGKCWINLARKEIP
KHHKIFINFHRRQLTDAKRIAEMCQREVKMKVSRSLKVMRGAAIRTRKLARDMLVFWKRV
DKEMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKSTLPSEAV
TLGDEMINDPEILLASTEVRPGEEEDPEEAELRKEALKAAQDAVSKQKMMTSAFDSECLK
LRQAAEIEPSQQDVAAADIDLLHPSTMPVASTVQAPELFKGTLKDYQLKGLQWLVNCYEQ
GLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEIGRFCPDLKT
LPYWGGLQERVVLRKNINPKRLYRRDAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQ
AIKSANSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSK
GIENHAEHGGSLNEHQLSRLHAILKPFMLRRVKKDVVSELTGKTEITVHCKLSSRQQAFY
QAIKNKISLAELIDSSRGHLNEKKILNLMNIVIQLRKVCNHPELFERNEGSSYFYFGDVP
YSLLPAPFGELEDVFFSGGRSPVTYQMPKLVYRGANRSSMLHSTTGQGVNKELFEKYFNI
YSPENIHRSILQEIHESDVGYIRSGTFGFTRLVDMSPMEVAFSATGSLLEKLLFSIVRAN
RQFLDEILDLMESGDDDLCCSHLGRDKVRAVTRMLLLPSKSEANFLRTRLATGPGDAPFE
ALAMEHQDRLLANVNLLNSIYSFIPRTRAPPINAHCSDRNFAYEMLEELHHPWIKRLLVG
FARTSEYNGPRKPGAAHHLIQEIDSELPITQPALQLTYQIFGSCPPMQPFDPAKMLTDSG
KLQTLDILLKRLRAGNHRVLIFAQMTKMLDILEDYMHYRKYRYLRLDGSSTIMDRRDMVK
DFQHRNDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTV
YRLICKETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEQKMKEI
PLQAKERQKRKGGTKGIRIGADGDASLEDLTNSEFVGDDALEPEKAKLSNKKRKGSTDKQ
TPRSRPQKNPKNLQSASPNSLLEDDIDGFPQNIGMQQQRPKRQKRPTKSVNESLEPAFTA
TIPMNREGNHNHPLSDISSGGGRGGAEEEGLRHNNPYAG
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggaccctaagaagcagtattcgtactccaatctcttcaatctcgagtctttgattaac
ttccagctgccccaacttgatgatgattttgattatcatgggaatagcagtcaggacgag
agcagaggtagcccaggtggaacggccggaaaccagattaatggtacaatgtctggtagg
gagttgaagaaaaagaggcgaacttcatatagtagtgacgaggatggggacagggacaga
gctcatactacctatatttcagaggaaaagtatagaacaatgctgggagaacacgttcaa
aagtataagaggaggcttggtaattcctcagcaagccctgcagctattcgtaatggagta
cctgtgatgagaggtggtggaggttccaaggaccagaagtcagcaaatgatcatagagga
ggagcggtcagacttgcctctacatcagaattttttaacaatagcactcagagcttagga
aaccatattcagtcagattttctaggaccatatggtggtgatagatctatttatgaacct
gctttcttggatcttggggaggacatcacatacaagatccctccaccttatgaaaagctg
gcattatcattgaacttgccaaccatgtcagatattcaagttaatgaaatttacctcaag
ggtacacttgatttggagactttggctgcaatgatggcttctgataagaaacttgggacc
aaacgtcaggcaggaatgggtgatcccaagccacaatttgaatctcttcaggcacgactg
cgagctcagccgactaataatgctggtcagagattcagtctgctagtcagcgaagctgca
ttagaggcttcttccatgcctgagggggctgcaggtggtatacggcgttgcatattgtca
gacggtggtgtcttacaggtttattatgtgaaagtgttagagaaaggagacacctatgag
attattgaacgtagtctacccaaaaagccaaagttggagaaagatccttttgcgattgag
aaggaagaaatggaaaggattggaaaatgttggataaaccttgcaaggaaagaaatccca
aaacatcataagatatttatcaatttccacaggaggcaattgactgatgccaagcggatt
gcagaaatgtgtcagagagaggtgaaaatgaaagttagcagatcacttaaggtgatgaga
ggtgcagcaattcgtacaaggaaacttgctagggacatgctcgtgttttggaagagagtt
gacaaggagatggcagaagtaaggaaaagggaggaaaaagaagcagcagaagctttgaag
cgtgaacaagagcttcgtgaagcaaagagacaacaacaaaggctcaactttctgctatca
caaactgaactttacagccatttcatgcaaaataaatcaactttaccctctgaggctgtg
actttaggtgatgaaatgataaatgacccagaaatattgttagcttctactgaagttaga
cctggagaggaagaggatcctgaagaggccgaactgagaaaagaggctctgaaagctgca
caggatgcagtttcaaagcagaaaatgatgacaagtgcatttgatagtgaatgtctaaag
ctgcgtcaagctgctgaaattgaaccctcccagcaagatgttgcagctgctgacatagac
ttattgcatccgtcaaccatgcctgtggcttctactgtacaagcaccagaattattcaag
ggtactcttaaagattatcagttgaaagggctccagtggcttgtaaattgttacgagcag
ggtttaaatggcattcttgctgatgagatgggtcttgggaaaacaatccaggccatggct
ttcttggctcatttggcagaagaaaagaatatatggggtccctttttagttgttgctccc
gcatcagtcttgaataactgggccgatgaaattggtcgtttctgccctgatctaaaaact
cttccatattggggaggtttacaagaacgagtggtgcttcgaaagaacattaacccaaaa
cgtctttatcgtcgggatgctggattccacattctcattaccagttatcagctactagtg
tctgacgagaaatactttagacgtgttaaatggcaatacatggtgctggatgaagcccag
gcaatcaaaagcgcaaacagtataagatggaagacattgctgagtttcaattgtcgaaac
cgtttgcttctgactggtactccagttcaaaataacatggctgagctgtgggcgctcctc
cactttattatgcctaccttatttgatagccatgaacaatttaatgaatggttttcaaaa
ggaatcgaaaaccacgcggagcatggtgggtcactaaacgagcaccagctcagccgtctg
catgcaattttgaaacctttcatgctgcggcgggttaaaaaggatgtggtttctgagttg
actgggaaaactgaaatcacagtgcactgtaagttgagttctcgtcagcaggcattttat
caagcaataaaaaataagatatcccttgctgagttaattgatagcagccgtgggcatctt
aacgagaagaaaattctaaacctgatgaatattgttatccagctaaggaaggtttgcaac
catccagagctctttgagagaaatgaaggaagttcttacttttattttggagatgttcca
tattcacttcttcctgctcccttcggggaacttgaggatgtattcttttctggcggtcga
agtcctgttacataccagatgccaaagctggtttaccggggagctaatagatcgagcatg
cttcactctactacggggcaaggtgtaaataaagaattatttgagaagtactttaacata
tattctccagagaatattcaccggtcaatactccaagaaattcatgagtcagatgttgga
tatatacggagtggaacattcggttttactcgcttagttgatatgtcacccatggaggtt
gcattttcggcaactggttctttattggagaaattgttattctcaattgtgagagccaac
agacaatttttagatgaaattttggacttgatggagtctggggatgatgatctctgttgt
agtcaccttggaagggacaaagtaagagcagtgacacgaatgttattgcttccatcaaag
tcagaagcaaactttttaagaacaagacttgcaacagggcctggtgatgcaccatttgag
gctttggccatggaacatcaggataggcttttagctaatgttaatctcttgaactcaata
tactcctttattcctagaacaagagcacctcctataaatgctcattgctcagatagaaat
tttgcttatgaaatgcttgaagaactacaccatccatggattaaaaggttgttggttggg
tttgcgcgcacttcggaatataatggtcctaggaaaccaggtgctgcacaccatttaata
caagagatagactctgaattacccatcacacaacctgctcttcagcttacgtatcaaatt
tttgggtcatgtccacccatgcaaccatttgaccctgcaaagatgctaacggactcaggg
aagcttcaaacacttgatatattattaaagcgtttgcgagcagggaatcaccgtgttctt
atctttgcacaaatgacaaaaatgttggatattctagaggattacatgcactacaggaaa
tataggtacttgaggcttgacggatcttccactataatggatcgacgagacatggtcaaa
gatttccagcatcggaacgacatctttgtgttcttgctgagtacaagagcaggggggctt
ggtatcaacttgacagctgctgacactgtcatcttctatgagagtgactggaatccaact
ttagatttacaagcaatggatagagctcataggctgggtcaaactaaggatgttactgtt
tatcgcttaatctgcaaagagacggttgaagaaaaaattctgcagagagccagtcagaaa
aacaccgtgcagcagcttgtcatgacaggtggacatgtccagggtgaccttttggctccg
gaagatgttgtttctttgttgattgatgatgcacaattggagcagaaaatgaaggaaatt
cctcttcaggctaaagagagacaaaagaggaaaggtggcacaaaaggcattcgtattggt
gcagatggtgatgcatcattagaagatcttacaaacagtgaatttgttggggatgatgcc
cttgagccggagaaagcaaaattaagtaataaaaagaggaaaggttccacagacaagcaa
accccaagatcaaggcctcaaaagaatccaaaaaatctacaatctgcatcacccaactca
ctattggaagatgatatagatgggtttccacaaaacattggcatgcaacaacaaaggcca
aaaagacagaagaggccaactaagagcgtaaatgaaagccttgaaccagcatttactgcc
accattcctatgaaccgagaggggaaccataaccatcctttgtcagatatcagctctggt
ggtgggagaggaggggctgaggaagagggattgagacataacaatccgtatgctggctaa
DBGET
integrated database retrieval system
