Solanum lycopersicum (tomato): 101260050
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Entry
101260050 CDS
T02665
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101260050
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
101260050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
HB_ELP1
TASOR_alpha-beta
tRNA_Me_trans_M
Motif
Other DBs
NCBI-GeneID:
101260050
NCBI-ProteinID:
XP_004239777
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Position
5:67748794..67756145
Genome browser
AA seq
1314 aa
AA seq
DB search
MKNLKILKEQFSKIQLQSEDEVISFAAFDVERNRLFLASSSNFIYTLSLPSSNNAGGWNS
ISDNLVDLEPGDFITSMDYLMEKEALIIGTSYGLLLLYTADDNTTEIVGRLEGGVKCISP
SPDGDLLGVITGFGQILVMTPDWDVLYEMALDDLPEDIDVHEHTYSSNYSSESPISWRGD
GKYFATLSRVNNSQTLHKKLKIWERDSGALHSVSESNSFMGSTLDWMPSGAKIAAVYDRK
EDRKCPSIVFFERNGLERSSFCLNVEIDATIELVKWNCNSDLLAAVVRGEKYDSLKIWFL
SNNHWYLKQEIRYMKDDRVRFMWDPIKPLQLVTWTTSGHITGYNFVWNTAVMNNSVALVI
DDSKILITPLSLSLIPPPMYLFCLNFPSAIQSMAFCSRSSLNHLAASLSDGRLCVVELPA
IDCWEELEGKEFDVDAASFDSGYNSFIHLAWLDSHKLLGVSHYLVSNSAIKESSKDKLSM
YCLQEIDLMCSEDRLPNSVTCSGWQAKGLNRLSLEGTVIGIAPNQGNGCSAYVQFDGGEV
FEYALKLADARGLHQKREDMSFSSSCPWMDLVQIGGCLPQKALLFGLDDSGRLLVGERTL
CNNCSSFSFYSNSADHSVTHLILSTKQDLLFIVDISDILKGELEVKYGNFLAVFKHRKGE
DERNYIQIWERGARIIGVLHGDESAIILQTVRGNLECVYPRKLVLASIINALIQGRYKDA
LLMVRRQRIDFNVIIDHCGWQNFVQSAAEFVKQVNNLSYITEFVCSIKNENIMKTLYKNY
ISLPHDIEAKAVDGDLKSSHSNSKIHSVLLAIRKALEEHVTESPARELCILTTLARSDPP
ALEQALERIKIIRERELSGSGELRRELYPSAEEALKHLLWLSDTEAVFEAALGLYDLNLA
AIVALNSQKDPKEFLPYLQELENMPIVLMRYNIDLKLQRFEAALQHIVSAGDAYFEDSMI
LMKKNPQLFPSGLQLITDSVKRNQVLEAWGDHFSSTKCFEDAAATYMCCSCLDKALKAYR
ECGNWGGVLTVAGLIKLGKEEVLQLAQELCDELQALGKPGDAAKIALEYCADVNAGINFL
VSAREWEEALRTAFLYRRDDLVLEVKTASLECASSLVSEYEEGLEKVGKYLTRYLGVRQR
RLLLAAKLQSDERSINELDDDTASETSSNFSGMSAYTLGTRKGSAASINSRASTKARDMR
RQRNRGKIRAGSPGEEMGLVEHLKGMSLTSGAKRELKSLLICLVMLQKEDIARKLQHVAT
NFQLSQMAAVKLADEAISDDIVNEHFYVLDNYIPKIKEDMQHSELFSWQSKVLI
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatctgaagatattgaaggagcaattctcaaagattcagttacagtccgaagat
gaagttatcagctttgcagcatttgacgttgaacgcaatcgtctcttcttagcttcatct
tcaaacttcatatacactttatctcttccatcatctaataatgcaggaggttggaattcc
atatcagataaccttgttgatttggagcccggggatttcattacttccatggattattta
atggaaaaagaagcgttgattattgggacttcgtatggtcttctattgctatacactgca
gatgataatacgacagaaattgttggccgattggagggtggagtaaagtgtatctcacct
agtccagatggagatcttcttggtgtaattactggttttggacagatactagtgatgaca
cccgactgggatgttttatacgagatggctcttgatgatctacctgaagatattgacgta
catgaacatacatactcttctaattattcatcggaaagccctatttcatggcgaggtgat
ggcaaatacttcgcaacgttaagcagggtgaataattctcagaccttgcataaaaagcta
aaaatctgggaacgggactcaggggcactccattctgtttcagaatcaaattctttcatg
ggatcaactttggattggatgcccagtggagccaaaattgctgcagtttatgaccggaag
gaagatagaaaatgcccatctatagttttctttgagaggaatggattagaaagaagctca
ttttgcctcaacgtagaaattgatgctactatagagcttgtgaagtggaattgtaactcg
gaccttctagctgctgtggtcagaggggaaaagtatgactctctgaagatctggttctta
agtaacaaccactggtacttaaaacaagaaatcagatacatgaaggatgacagagtcaga
ttcatgtgggatccgataaagcctctacagttggttacttggactacaagtgggcatatc
acgggctataactttgtatggaatacagctgtcatgaataactcagtggcacttgtaatt
gatgactccaagatactaataacccctctttctttatctctcatcccaccacctatgtac
ctcttttgtttgaattttccctctgccattcagagtatggcattttgctctagaagttct
ttgaatcacctggctgcatccttgtcagatggcagattgtgtgttgtagagcttcctgca
attgattgttgggaggagctagaaggtaaagagtttgatgttgatgctgcctcttttgat
tcaggctataattctttcattcaccttgcatggttggattcacacaagcttcttggtgtt
agccattatctagttagcaactcagcaataaaagagtcctctaaggataagctttctatg
tattgcctccaagaaattgatcttatgtgttctgaagatcgtcttcctaattcagtgaca
tgctctggttggcaagctaaaggtttgaatagattgtctcttgaaggtaccgtaattggt
atagctcctaaccagggaaatggctgctcagcatatgttcagtttgatggcggggaagtg
tttgagtatgcgttgaagttggctgatgccagagggcttcatcagaaacgtgaggatatg
agtttttcttcatcttgcccctggatggatcttgtgcaaattggaggctgcttacctcaa
aaggctttgctttttggtcttgatgacagtggtagattgcttgttggtgaaaggacattg
tgcaacaattgcagcagtttttctttctactcgaattctgctgaccactctgtcacccat
ttgattctttcaactaagcaggatttgctgtttattgtcgatattagtgatatcctgaaa
ggagaactggaggttaagtatgggaacttcctggcagttttcaagcacagaaaaggagaa
gatgagagaaactatattcaaatatgggaaagaggtgccagaatcataggtgttttgcat
ggggacgagtctgctatcatacttcaaacagttcgagggaatcttgagtgcgtctacccc
agaaaattggttctagcctcaataattaatgctttgattcaagggcgttacaaagatgca
ttactcatggtaagaaggcaaagaattgatttcaatgttattattgaccattgtggttgg
caaaactttgttcagtcagctgctgagtttgtgaagcaagtgaacaatttaagttatata
actgaatttgtctgttcaataaagaatgaaaatatcatgaagacactgtacaaaaactat
atatccctacctcatgacattgaggctaaagctgtagatggagaccttaagagttctcat
agcaatagcaagatccactctgtcttgctggccataaggaaggctcttgaggagcatgta
actgaaagtcctgcaagggaactttgcattctgaccactttagctcgaagtgaccctcca
gctcttgaacaagctttagagagaataaaaataatccgagaaagggaattatcaggttca
ggtgaactgagaagggaactctacccttctgccgaggaagctttaaaacatcttttgtgg
ttgtctgatacagaggcagtttttgaagctgcattaggtctttatgatttgaaccttgca
gctatcgtcgccttgaattcacaaaaggacccgaaagaatttcttccctatctgcaagaa
ctcgagaacatgccaatagtattaatgcgatacaatatagacctgaaattgcagaggttt
gaggctgcgcttcagcacattgtttctgcaggagatgcttactttgaagattctatgatt
ctcatgaagaaaaatccccagcttttcccctcgggactccaattgatcactgactctgtc
aagagaaaccaggtacttgaggcctggggagatcattttagttccacaaaatgctttgag
gatgctgctgcaacatatatgtgctgttcttgtttggataaagctttgaaggcttatcgt
gagtgtggtaattggggtggggttctgacagtagctggtctcattaaactagggaaggag
gaagtcttgcaactagcacaggagctttgtgatgaactccaagcacttggtaaaccaggg
gatgctgcaaaaatagctttggagtattgcgcagatgttaacgctggtattaatttcttg
gtcagtgcaagggaatgggaagaagctttgagaactgcatttctttacaggagagacgat
ctggtccttgaagtaaagactgcatcacttgagtgtgccagctcactggttagtgaatat
gaggaagggctagagaaagtggggaagtacttgactcgatatttaggtgttcgacaacgg
agattattacttgctgcaaagctacagtcagatgagcgatcaataaatgaacttgatgat
gatactgcttctgaaactagtagcaatttcagtggaatgagtgcatatacattggggaca
agaaagggatcagctgcatcaataaactccagagctagtacaaaagcaagagacatgaga
cgtcaacggaatagagggaaaatacgtgctggaagtcccggtgaggagatgggtttggta
gagcatttaaaggggatgtcactgactagtggagctaaacgtgagcttaaatctctcttg
atatgccttgtgatgctgcaaaaggaagatattgccaggaagttgcaacatgttgctaca
aattttcaactgtcccaaatggcagctgtaaaattagctgatgaggccatatcagatgat
atagttaatgagcatttctatgttctggataattacattcccaaaataaaggaagatatg
cagcattcagagcttttctcctggcagtcgaaagtattgatttga
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