Solanum lycopersicum (tomato): 101260177
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Entry
101260177 CDS
T02665
Symbol
ABCG47
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101260177 (ABCG47)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sly02000
]
101260177 (ABCG47)
Transporters [BR:
sly02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
101260177 (ABCG47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA
AAA_16
AAA_22
AAA_30
RsgA_GTPase
AAA_18
AAA_25
AAA_23
AAA_33
AAA_28
nSTAND3
NTPase_1
RuvB_N
Zeta_toxin
NACHT
AAA_5
cobW
AAA_17
AAA_19
AAA_11
T2SSE
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
101260177
NCBI-ProteinID:
XP_004247842
LinkDB
All DBs
Position
9:68400832..68408424
Genome browser
AA seq
1428 aa
AA seq
DB search
MEPLDLSNLRGRSIRGSMRENSNSIWRNNGVEVFSRSNRDEDDEEALKWAALEKLPTYDR
LRKGILFGSQGVTAQVDVDDLGVSQRKSLLERLVKVADEDNEKFLLKLKNRIDRVGIDFP
SIEVRFEHLNIEADAYVGSRALPTFTNFISNFIESLLDSIHITPSKKRSVTILKDVSGYV
KPCRMTLLLGPPGSGKTTLLLALAGKLDSDLRVTGKVTYNGHELHEFVPQRTAAYISQHD
LHIGEMTVRETLEFSARCQGVGSRYEMLAELSRREKAANIKPDVDIDMFMKAISTEGQES
KVITDYILKILGLDICADTMVGDQMIRGISGGQKKRVTTGEMIVGPSKALFMDEISTGLD
SSTTYSIVNSLKQSVQILKGTALISLLQPAPETYNLFDDIILLSDGYIVYQGPREDVLEF
FESMGFKCPDRKGVADFLQEVTSKKDQQQYWVRRDEPYRFITSKEFAEAYQSFHVGRKVS
NELSTAFDKSKSHPAALTTEKYGIGKKQLLKVCTEREFLLMQRNSFVYIFKFFQLMVIAL
MTMTIFFRTEMPRDTATDGGIYAGALFFTVVMLMFNGLSELPLALYKLPVFYKQRDFLFY
PSWAYAIPSWILKIPVTFLEVGMWTFLTYYVIGFDPNVGRFFKQFLLLVLVNQMASGLFR
FIAAVGRTMGVASTFGACALLLQFALGGFALARTDVKDWWIWGYWTSPLMYSVNAILVNE
FDGEKWKHTAPNGTEPLGPSVVRSRGFFPDAYWYWIGIGALAGFTILFNIAYSLALVYLN
PFGKPQATISEEGENNESSGSSSQITSTTEGDSVDENQNKKKGMVLPFEPHSITFDEVVY
SVDMPPEMREQGSSDRLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYID
GSIKISGYPKKQETFARISGYCEQNDIHSPYVTVHESLVYSAWLRLPQDVDEHKRMMFVE
EVMDLVELTPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA
IVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRESCHLIKYF
ESMPGVGKIEEGYNPATWMLEVTSSSQEMSLGVDFTELYKNSDLCRRNKALITELSVPRP
GTSDLHFENQFSQPFWVQCMACLWKQHWSYWRNPAYTAVRFLFTTFIALMFGSMFWDLGT
KVSRPQDLTNAMGSMYAAVLFLGVQNASSVQPVVSVERTVFYREKAAGMYSAIPYAFAQV
FIEIPYVFVQAVVYGLIVYSMIGFEWTVAKFFWYFFFMFFTFLYFTFFGMMTVAITPNQN
VASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWACPVAWTLYGLIASQFADLQDIVNG
QTVEEYLRNDYGIKHDFLGVVAGVIVAFAVVFAFTFALGIKAFNFQRR
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggagccattagatttaagtaatttacgcggtcgtagtattagaggaagtatgagagaa
aatagtaattcgatatggagaaataatggagttgaagtattttcaagatcaaatcgagac
gaagacgatgaagaggcattaaaatgggcagcacttgaaaaattaccaacttatgataga
ttaagaaaaggtatattgtttggatcacaaggtgttactgctcaagttgatgttgatgat
cttggtgtttcacaaagaaaaagtttactcgaaagacttgttaaagttgctgatgaagat
aatgaaaagttcttgttgaaactcaaaaacaggattgacagggttggaattgattttcca
tcaatagaagtgagatttgagcatttgaatattgaggcagatgcatatgttggaagcaga
gctttgcctacttttacaaacttcatttctaacttcattgagagcttattggattcaatt
cacatcactccatcgaaaaaacgttcagttaccattctcaaggatgttagtggctacgtc
aagccctgtcgaatgactcttcttttaggacctcctggttctggaaaaacaactttgtta
cttgcgttggctggaaaactcgattctgatctaagggttactggaaaggtgacgtataac
ggacatgaattacatgaatttgtgccacaaagaacagcggcttatattagccaacatgat
ttacacattggagaaatgactgtcagagaaactttggagttctccgcaagatgtcaagga
gttggttcacgttatgaaatgttggctgaactatcgagaagagagaaagcagctaatatc
aaaccggatgttgatattgacatgttcatgaaggctatatcaacagaaggacaagaatcc
aaagtgattacagactatattcttaagatacttggactggatatttgcgcggatactatg
gtaggagatcaaatgataaggggtatttcgggaggacagaagaagcgtgtcactactggt
gaaatgattgtcggaccgtctaaagcccttttcatggatgaaatttcaactggacttgac
agttccacaacttactccattgtgaattccctaaagcaatctgttcaaatcttgaaagga
acagctctgatttctctcttgcagcctgctcccgagacttacaacttgtttgatgatatc
attttgctatcagatggatacattgtttatcagggtcctcgagaggacgtgctcgagttc
tttgaatccatgggattcaaatgccctgacagaaaaggcgtggccgatttcttgcaagaa
gtgacatctaagaaggatcaacagcagtattgggtaaggagggatgagccttacagattt
atcacatcgaaagaatttgctgaggcgtatcagtctttccatgttgggagaaaagtaagc
aatgagctttcaactgcatttgacaagagcaaaagccaccctgctgctttgaccactgaa
aagtatggtatcggaaagaaacagcttttgaaggtttgcacagaaagagaattcctgcta
atgcagcggaactcgtttgtttacatcttcaaattctttcagctcatggtcattgcactt
atgacaatgaccatattttttcgaactgagatgcctcgggatactgcaacagatggagga
atatatgctggtgctctcttttttacggttgttatgcttatgtttaatggtttgtcggag
ctccctttggcactctacaagcttccggtcttctacaaacaaagggactttctcttctat
ccttcatgggcttatgcaatcccttcatggatcctaaaaatccctgtaacttttcttgaa
gttgggatgtggacgttcctcacgtattatgtcattggattcgatcctaatgttggaaga
tttttcaaacaatttttgctactcgtactagtaaaccagatggcatcaggattgttccga
tttatcgcagcagttggaaggaccatgggagttgctagcacatttggagcatgtgctctt
cttttacaatttgcattgggtggtttcgcccttgcacgaactgatgtgaaggactggtgg
atttggggatactggacgtcaccactcatgtactcggtgaatgcaattcttgtgaatgaa
tttgatggagaaaagtggaaacatactgccccaaatgggactgagccacttggaccttcg
gtggtgagatctcgaggattctttcccgatgcatattggtactggataggtataggggca
cttgctggattcacaattctgtttaacatcgcctacagtcttgctctcgtttatcttaac
ccatttggaaagccacaagctacgatttcagaagagggtgagaacaacgaaagtagtgga
tcatcgtcccagataactagcacaacagaaggagattctgtcgatgagaatcagaataag
aagaagggcatggttcttccatttgaaccccattccatcacctttgatgaagttgtatac
tccgttgacatgcctccggaaatgagagagcagggtagcagtgatagattggtacttttg
aagggtgttagtggagctttcaggccaggtgttctcacagctttgatgggagttagtggg
gccggtaaaacaacgttgatggatgtcttggctggaaggaaaaccggaggttacattgac
gggagcatcaagatatctggatatcccaagaagcaagaaacttttgcacgtatttctgga
tactgtgaacagaatgacatccattcaccttatgttacagttcacgagtccttggtttac
tcggcttggctgcgtttacctcaagacgttgatgaacacaaaagaatgatgtttgttgag
gaagttatggatcttgtcgagcttacaccactaagatcagccttagtcgggttgccagga
gtcaatggtctgtcaactgagcaacgtaaaaggttgacgattgctgttgaactagtagca
aacccctcgatcattttcatggacgaaccaacttcagggttagatgcaagagctgctgca
attgtgatgagagctgttaggaacactgttgatacaggaagaaccgttgtttgtaccatt
catcagcctagcattgacatttttgaggcttttgatgagttgtttctaatgaaacgagga
ggacaagagatatacgttggtccattgggtcgcgaatcatgccatttgattaaatatttt
gagtccatgcccggtgttggcaaaatagaggaaggttacaatccagcaacttggatgtta
gaagtcacatcttcatctcaagaaatgtcattaggggtcgatttcaccgaattatacaag
aactcagacctctgcaggaggaacaaagccttgattacggaactaagtgtgccacgacca
ggcacaagtgacctgcattttgaaaaccaattctcacagccattttgggtccaatgtatg
gcttgcttatggaagcaacactggtcgtattggcgtaatccggcttacactgcagtcaga
tttctcttcactacgttcatagcactcatgttcgggtcaatgttctgggatctcggtacc
aaagtgagtaggcctcaagatctaaccaacgcgatgggatctatgtacgctgctgttctc
ttcctcggtgtacaaaatgcatcatcagttcagcctgttgtatcggttgaacgtactgta
ttctacagagaaaaagctgccgggatgtactctgccataccatatgcctttgcacaagtt
tttattgaaattccttatgtatttgtacaagctgttgtctatggtctcattgtctactct
atgattggattcgaatggaccgtagcaaaattcttttggtactttttcttcatgttcttc
actttcctatacttcaccttctttggcatgatgactgtggctattaccccgaatcaaaac
gttgcttccattgtcgctggattcttctatacagtatggaatctcttctcaggattcatc
gttccacgacctcgtattcccatatggtggagatggtactactgggcgtgccctgttgcc
tggacgttgtatggtttgattgcatcgcagtttgcagaccttcaagatatcgtcaatggc
caaactgtggaagaatacttgagaaatgactacggaattaagcacgattttctcggtgtt
gttgcaggcgtgatcgttgcatttgctgttgttttcgccttcacatttgctttgggaatc
aaggcattcaattttcagagaagatag
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integrated database retrieval system
