Solanum lycopersicum (tomato): 101260232
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Entry
101260232 CDS
T02665
Name
(RefSeq) histone deacetylase complex subunit SAP18
KO
K14324
histone deacetylase complex subunit SAP18
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03013
Nucleocytoplasmic transport
sly03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101260232
03015 mRNA surveillance pathway
101260232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101260232
03036 Chromosome and associated proteins [BR:
sly03036
]
101260232
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101260232
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
101260232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAP18
Motif
Other DBs
NCBI-GeneID:
101260232
NCBI-ProteinID:
XP_004240113
UniProt:
A0A3Q7GHU0
LinkDB
All DBs
Position
5:62360634..62365675
Genome browser
AA seq
156 aa
AA seq
DB search
MADVQRRGRPLPPPPPRGPHGPPPQRIAPRPVPVDREKTCPLLLRVFTKVGGHHNVNEFA
VRGKEPKDEVQIYTWMDATLRELTDLVKEVAPEARRRDAILSFAFVYPDKRGRFVVREVG
TTFSYPNMRRPDNGSKTLSELKFQIGDYLDVAIMFQ
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttcagagaagaggaagaccattacctcctcctccacccagaggtccacat
ggtccacctcctcaaaggattgctccacgccccgtaccagttgatcgcgaaaagacttgt
cctctgttgcttcgtgttttcactaaggttggaggccatcacaatgttaatgaatttgct
gtgaggggcaaggaacccaaagatgaggtccaaatctatacatggatggatgctactctg
cgcgaactaactgatctggttaaagaggtagctccagaagcaagacgaagagatgcaatt
ttgtcctttgcttttgtctatcctgataaaagggggcgatttgtcgttagagaggtgggg
actacattttcttatcccaatatgaggcgaccagataatggcagcaaaacattgagtgaa
cttaaatttcagataggagattacttggatgtggctatcatgttccagtga
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integrated database retrieval system
