Solanum lycopersicum (tomato): 101260283
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Entry
101260283 CDS
T02665
Name
(RefSeq) autophagy-related protein 2 isoform X1
KO
K17906
autophagy-related protein 2
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101260283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101260283
03029 Mitochondrial biogenesis [BR:
sly03029
]
101260283
Membrane trafficking [BR:
sly04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101260283
Mitochondrial biogenesis [BR:
sly03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101260283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
101260283
NCBI-ProteinID:
XP_010315233
LinkDB
All DBs
Position
1:91579572..91597358
Genome browser
AA seq
1982 aa
AA seq
DB search
MWNFARSAEKLFSRWAIKRFCKFWLKKKLGKFILGDIDLDQLDVQARAGIIQLSDLALNV
DYLNQKFGSAAAVYVQEGSIGSLLMKMPWQGDGFRIEVDELELVLAPEATFSPSTFGNCL
STQDGAASVNQESGNRKDVAVDDCGAKTTAFDVHEGVKTIAKMVKWFLTRLNVEVRKLII
VFDPCLGEEKQRGLCRTLVLRVSEVACGTCISEGDSLDTEAADANLLGLTQMTNFIKFSG
AVLEFLQIDEVVDKTPNPCASGTATGEWSRNYSPNVTTPIITGERGGLSGNLKLTIPWRN
GSLDIREVEVDASIDPLVIKLQPSSIRCLIHLWGILKDTGQKKDTEFPFCNSVMTCDSTK
ADTSLLSMDEVLPDSKANSAECAFESEPVREALLSESRLISDWVSRSRKVNDEEEPDFGE
SVHQFFECFDGLRNSQSALGNSGMWNWTCSVFSAITAASNLASGSLLVPSDQQHLETNIR
ATVAKVSLLFSFIDEEERHCCTVDADKGNAGFYVHYISASFQDLLLVLQVQRQEVNFEAT
VQHVALTDHFSREDDTVDFKWCTYNNIKKIQDAIQTAIPPLDWSTKNVDLDNQSASAAPY
PLRMNFTDGFPHPRKKISLFADDGVQVELLKTFGASLCQATISSSGNSFVGPTSFSLKFP
PFVFWVNFNLLTKISEFFKKIEDPIGTSSTLAHEDKCVASSKGNGRTSPCSDTRRSSEQE
SFRGTVSLPTARIILAFPCGKGEDFRSYYCWQQFISLDVSSPSAPVDKASHATKKCSATS
SKSWNSVAKLCSLSLNFGKLDVNLITPLSGENVEITYDSVLKYRLSAQKLMTTSNGRGPS
VVTFSWQDCASTGPWIMKRARQLACSENARCLEKFRGKGYDFSSVTTVKDSGDIDNIRQE
MIISSEFCIHAHLSPVIISLSKSEFLKLNDIVSQVIDRLSGLDLNLVDTEKVTAASQSSV
LVECDSVTISINEEAMEKNNKGSLQNEITGSWHSFTLELQNFGLLSVSDLGGTNGSSFLW
VTHGEGNLWGSVTGVPSEKFLLISINDSSSSRGDGEGSNVLSSKLSGLDIIHFQDPQSSA
VSITVRCGTVVAVGGRLDWFDTIFSFFASPSPEATQECDSNVQKEGETSVPFESSFILSL
IDIALSYEPYLNKLTMHGCADSQSSSPNCEEAIDEQHVACLLAASSLRFSSTTFADSVIK
DYKITAQDLGLLLSAVRAPNCAGSVYSVEHLRKTGYVKVAQGSDVEALLRISSGSGALWE
IDCSESQIVLNTCHDTASGLTRLAAQMQQLFAPDLEESVVHLQTRWNNVQHAREGKEFCT
FDVAVASTSDMQPMTGDVSSKCGNINLMDEICEDAFQLNHEEDDQADHLESPIYLSPNNS
FIGETFYYSNEDSPRFLNSSPLTCSVPVGGQETSETPLSPEQPPQFIEEYFLSDLCPLSE
LALTDQSSKDIIRYAPSPLRSGDDFRGSTGWYGGNCLRILENHVSEVDRKAGSEELTESE
ASSILSEPDENKNVKGRIVLNNMNIIWRLYAGSDWQNVESNTQQSTGTCGRDTTVCLELT
LSGMRFLYDIFPDGGTRVSRQSITVHDFFVKDNSNAAPWKLVLGYYQSKGCLRKSSSKAF
KLDLEAVRPDPAIPLEEYRLRIAFLPMRLHLHQNQLDFLISFFGGTKSAVTPSQSSSQNL
SKSEIVAKRTKFGGKAVIEEALLPYFQKFDIWPVHLRVDYSPCRVDLAALRGGKYVELVN
LVPWKGVDLHLKHVQALGVYGWSGIGEIIVGEWLEDISQNQIHKLLKGLPPIRSLVAVGS
SAAKLVSLPVKSYKKDQKLLKGMQRGTIAFLRSISLEAIGLGVHLAAGAHEILLQAEYIL
TSVPPSVTWPVQSGGNTSVRFNQPRDSRQGIQQAYESMSDGFSKSASALIRTPIKRYQRG
AGMGSAFATAVQAAPAAAIAPASATARAVHCALLGVRNSLNPERKKESLEKYLGTNPSQQ
YM
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacttcgcgaggtctgcggagaagttgttctcgcgctgggcaatcaagaggttt
tgcaagttctggttgaagaagaaattggggaaatttatacttggtgatattgatctcgat
caactcgatgtgcaagccagggccggtatcattcagctctctgatcttgccctcaatgtt
gattatctcaatcaaaagtttggttccgcagcagccgtatatgttcaagaaggatcaatc
ggctctctgcttatgaaaatgccttggcaaggggatggctttcggatagaggtggatgaa
cttgagcttgtgcttgctcctgaggcaaccttttctcctagcacatttggaaattgtctt
tcaactcaagatggtgctgcttcggtgaaccaagaatcaggaaaccgcaaggatgttgct
gtcgatgattgtggggctaaaacaactgcttttgatgttcatgaaggggtcaagaccatt
gctaaaatggttaaatggtttcttactaggttgaatgtagaagttagaaaattgatcata
gtatttgatccctgtttaggtgaggaaaaacagagagggctttgcagaaccttagtatta
agagtaagtgaagtagcctgtgggacatgcatctcggaaggggattctctggatactgaa
gcagcggatgctaaccttttggggttgactcaaatgacaaattttatcaaatttagtgga
gcagttcttgaattccttcaaattgatgaggttgttgataagacaccaaatccatgtgct
tcaggaacagctacaggtgagtggtcaagaaactattcaccaaatgtcacaactcctata
ataaccggggaaagaggcggactttctgggaacctaaaattgactataccttggagaaat
ggttccttagatatccgcgaagtggaggtagatgcttctattgatcctctggtaatcaaa
cttcaacctagtagcatcagatgcctaatacatttgtggggaattttgaaagatacgggt
cagaagaaggatacagaatttccattctgtaattcagtaatgacttgtgattcaacaaag
gcagatacttctctgctcagtatggatgaggtgcttccagattctaaagcaaattctgct
gaatgtgcatttgagagtgaacctgtgagggaagctttgctgtctgagtcccgtcttata
tcggactgggtgagtagaagccggaaagtcaatgacgaagaggaaccagactttggggaa
agcgtgcaccagttttttgagtgctttgatggtctgagaaactcgcagtcagctctagga
aacagtgggatgtggaattggacttgttctgtttttagtgcgataactgctgcttctaat
cttgcttctgggtcgttgcttgttccttctgatcagcagcatcttgaaaccaatattagg
gctacagttgccaaagtatctcttcttttttcttttattgacgaggaagagagacattgc
tgcactgtggatgctgataaagggaatgctggtttttatgttcattatataagtgcaagt
tttcaagatttgcttctggtattgcaggtacagcgccaggaagtgaattttgaagcaaca
gttcaacatgtggcacttactgatcacttctcaagagaagatgacactgttgatttcaaa
tggtgtacatataataacatcaaaaaaattcaagacgcaattcaaactgccatcccacct
cttgattggtccaccaagaatgttgatctggataatcagagtgcatctgctgctccttat
ccattaaggatgaattttactgatgggttccctcatccaaggaagaaaataagtcttttt
gctgacgatggagtgcaggtagaattgcttaagacttttggtgctagcctctgtcaagca
accataagttcttcaggaaactcatttgttgggccaacatctttttcattgaagtttcca
ccatttgttttctgggtgaactttaatttgttaactaaaatctcagaatttttcaagaaa
attgaggatcctattggaacatctagcactctggctcatgaggataagtgtgtagcttca
tccaaagggaatggaaggactagcccttgctctgatactagaagaagttcagaacaagaa
agtttcaggggcactgtatctcttccaactgccaggattatattggcttttccttgtgga
aaaggtgaagattttaggagctattactgttggcaacagtttatttctcttgatgtttct
tcaccatcagctcctgtggacaaagcaagtcatgcaactaaaaaatgttctgctactagt
tctaaaagttggaattccgtggctaaattgtgctctttgtccttgaattttgggaagctt
gatgtcaacttaatcacaccattgtctggagagaatgttgaaattacctatgatagtgtt
ctaaagtatagactttcagctcagaaattaatgaccacatcaaatggaagagggccttct
gttgttaccttttcttggcaggactgtgccagtactggtccttggataatgaagagagcc
agacagcttgcttgttcagagaatgcaaggtgcttagagaagttcagaggaaaaggatat
gacttttcgtctgtaaccactgtcaaggattctggggacattgataacattcgacaagaa
atgattataagctctgagttctgcattcatgcacatttatctcccgttataatttcttta
agcaaatcagaatttcttaaattaaatgatattgtgagtcaggtgattgataggttatca
ggactggacttaaatcttgttgatactgaaaaagtgactgctgcctctcagtcatcagtt
cttgttgaatgtgattctgtaaccatatcaattaatgaggaagccatggagaagaataat
aagggttcactacagaatgaaattactggttcttggcatagctttactctggaacttcag
aactttggcctattatctgtttcagatcttggaggaacaaatggttctagctttctctgg
gtaacccatggtgagggcaacttgtggggttcagttacaggggtcccgagtgaaaagttt
ctcctcatctccatcaatgactcttccagtagccgtggtgacggagaaggttcaaatgta
ttatcttctaagctgtcaggtttagatattatccactttcaagatccacagagcagtgcc
gtgtccatcactgtccggtgcggcactgttgttgcagttggtggacgcttggattggttt
gacacaattttctcatttttcgcttcaccctcccctgaagctacacaagaatgtgatagt
aatgtgcagaaagagggtgaaactagtgttccttttgaatcttcttttatccttagcttg
atagacattgccttgagttacgagccatacttaaataaattgacgatgcatggatgcgct
gattctcagtcaagttctcccaattgtgaggaagcaatagatgagcaacatgtagcatgt
ctgttggctgcatcttccttgaggttttccagtacaacctttgctgattctgttatcaag
gattacaaaattactgcgcaggatctgggtctgcttctttctgcagtgcgtgcaccgaac
tgtgctggcagtgtctacagtgtggagcatcttcgcaagacgggatatgttaaagttgct
caagggtcagatgttgaagctcttttaagaatcagttctggaagtggtgctctttgggaa
attgattgttcagagtcacagattgttctgaacacttgccatgatacagctagtggattg
acacgtttagctgctcaaatgcaacagctttttgcccctgacctggaagaatctgtggtt
cacttgcagacaaggtggaataatgttcagcatgcacgtgagggcaaagaattctgcact
tttgacgtggctgtagcatcaacttcagatatgcagcctatgactggtgatgtaagtagc
aaatgcggtaatatcaacttgatggatgaaatctgtgaagatgcatttcaattgaaccac
gaggaggatgaccaagctgatcatcttgaatcacccatttacctgtcacctaataatagt
ttcattggcgagacattttactacagtaatgaagactctccaaggtttttgaatagctcg
cctctcacttgctcagtcccagtaggtggacaagaaactagtgagactccattatcacct
gaacagccacctcagtttatcgaagaatatttcttgtctgacctatgtcctctgtctgaa
ctagcattgacagatcagtcatcgaaggatattattagatacgcgcccagtcctctaagg
agtggtgatgattttaggggaagtactggatggtatgggggcaactgtttaagaatttta
gagaatcatgtttcagaagtcgacagaaaagctggttcggaggagttgacagagtctgag
gcttctagcattctcagtgaacctgatgaaaataaaaatgttaagggtcgcatagttctt
aataacatgaatatcatctggagattgtatgcgggatctgattggcaaaatgttgagagt
aatacccagcaatctacaggaacttgtgggcgggatacaactgtttgtttagaactgaca
ctgtctggaatgcgatttctgtatgacatctttcctgatggtggaactcgggtatctagg
cagtccataacagttcatgatttctttgttaaagacaacagtaatgctgccccttggaaa
ctggtgctggggtactatcaatcaaaaggctgtttaaggaagtcttcttccaaagcattt
aagctggatctggaagcagtaagacctgatcctgctatccctcttgaggagtaccggtta
cgaattgcattcctcccgatgcgcttacatcttcatcaaaaccagttagattttctcatc
agcttttttggaggaacaaagtcagcagttaccccctcccaaagttcttcacaaaatttg
agtaaatcggaaatagtagcaaagagaactaaatttgggggtaaagcagtcattgaagag
gcactgcttccttattttcagaaatttgatatctggcctgttcatcttcgggttgactat
agcccttgccgtgttgatttagctgcattaaggggtggcaagtatgttgagcttgttaac
cttgtgccttggaagggggttgacctgcatctcaaacatgttcaagctctaggtgtctat
ggctggagtggcataggtgaaataatagtaggtgaatggttggaagatatatcccaaaat
cagattcataaactattgaaaggccttcctcctattcggtcattggtagctgttggttct
agtgcagcaaagttggtttctctgcctgtgaagagttacaagaaggatcaaaagttgcta
aaaggaatgcaaagaggtacaatagcgttccttagaagtatttcgcttgaagcaattggg
cttggagtgcacttggctgctggcgctcatgaaatccttctgcaagcagaatatatcctt
acaagtgttccaccatcagtaacatggcctgtgcaaagtggaggaaacactagtgtgaga
tttaatcaacctagagattcccgacaagggatccaacaggcttatgaaagtatgagtgat
ggcttcagtaaatctgcttctgctctaatacgcactcccatcaaacggtatcagcgtggt
gctggaatgggatctgcttttgcaactgctgtccaagcagctccagcagcagccattgcc
ccagcttctgccacagcacgagctgttcattgtgctcttctaggtgtaaggaacagcctc
aatccggagcgtaagaaagagtctttggagaaatatttggggacaaatccatctcagcag
tacatgtag
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