Solanum lycopersicum (tomato): 101260383
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Entry
101260383 CDS
T02665
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101260383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101260383
Membrane trafficking [BR:
sly04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
101260383
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
Sec7-like_HDS
BIG2_C
DCB
Mon2_C
Motif
Other DBs
NCBI-GeneID:
101260383
NCBI-ProteinID:
XP_004231109
UniProt:
A0A3Q7FFC9
LinkDB
All DBs
Position
1:94522018..94544820
Genome browser
AA seq
1716 aa
AA seq
DB search
MSASQALGGPSRCGWVLGPSLDKIIKNVAWRKHSQLVAACKSALDKLDSVVDDPVDPASC
TPLYGLSTSDADFVLQPLIMALDSSSPKVVEPALDCSFRLFSLGLIRCEIDTPTPTPSPS
HNPSSHSHIFRLIDSVCKCGALGDEAIELAVLRVLLSAIRSPYVLVRGDCLVHIVRSCYN
VYLGGMNGTNQICAKSVLAQMMIIVFTRVEENSMIVDFKTVSVAELLEFTDRNLNEGSSI
QIAQNFLNEIVDVKSKEGIAESKLCLQLENDNSEKKGELIDGEPGEGADLSGYSKIREDG
FMLFKNLCKLSMKFSSQEHADDNILLRGKVLSLELLKVIMDNAGPIWRSNERFLNVIKQF
LCLSLLKNSALSVMTIFQLLCSIFKNLLSKYRSGLKSEIGIFFPMLILRVLENVLQPSFL
QKMTVLGLLEEISKDPQIIIDVFVNYDCDVDAPNIFERTVNGLLKTALGPPPGSTTTLSP
VQDITFRSESVKCLVTIIKSMGMWMDQQLKVGDPNQDKVSDHEVSEAAISVSEEGNIDYE
LHPDANSEFSGAAALEQRRAHKLEIQKGVSLFNRKPSKGIDFLMSTKKIGNSPEDVASFL
KNTTGLNPTIIGDYLGEREEFPLKVMHAYVDSFNFEGMNFGESIRYFLRGFRLPGEAQKI
DRIMEKFAERFCKCNPNSFTSADTAYVLAYSVIMLNTDAHNSMVKDKMTKADFIRNNRGI
DDGKDLPEDYLGALYDQIVRNEIKMKADSSVPQNKQGNSLNKLLGLDGILNLVWKQREEK
PLGANGVLVRHIQEQFKVKSGKSESVYYVIADPAILRFMVEVCWGPMLAAFSVTLDQSDD
KNATSQCLLGFRHAVHITAVMGMQTQRDAFVTSMAKFTNLHCAADMKQKNVDTMKTIMSI
AIEDGNHLHEAWEHILTCLSRFEHLQLLGEGAPSDSSFFTSSGSESEEKTLKSAGFPSLK
KKGTLQNPTVAAVVRGGSYDSAAVGANSPTLVTPEQINNFISNLNLLDQIGNFELNHIFA
HSQRLNSEAIVAFVKALCKVSMSELQSPTDPRVFSLTKIVEVAHYNMNRIRLVWSHIWSV
LSEFFVAVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQQSNSA
EIRELIVRCISQMVLSRVNNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREYFR
YITETEALTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVSNEKNKNNDS
SIPVAEKEASDGLIFTDKDDYMSFWEPLLTGLSRLTSDPRSAIRKSALEVLFNILKDHGH
LFPCLFWINVFKSVIYPIFSPVNDSPEAEVKYDQSFKSRYTPPADGCLWDSETSVVAAQC
LVDLFVNFFDIVRSELPSVVSIMVGFIKGSGKDPAATGVASVMRLAGDLRGKFCEEEWEV
IFLALKEASYSTLPNFQKLLRTMDNIEISISDMETSSGAGLVYDESDDDNLHTAGYVVSR
MKDHIAAQLRIIQVSSDLYKMCRQSISVDTVTVLLGIYSAITSHAQQLKSEKVVQVELQK
ACSILEIPEPPLVIFENESYQNYLNFLHELLVSNPSFVEEKNIEPELVGVCEEILRVYLE
CAGLNSVKKKPDDKAIYQWNLPLGSAKKEELVARTPLVLSVLRILCSWQMDSFRKYISQL
FPLMIDLVRSEHSSGEVQIELSHFFQSCIGPIIMKL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcatctcaagcgctaggcggtccttcccgctgtggctgggtactaggtccgtct
cttgataagatcatcaagaacgtcgcctggaggaaacactcgcagctcgtcgccgcctgc
aagtccgctctcgacaagcttgattccgtagttgacgaccctgtcgatccagcttcctgc
acccctctctatggtctctctacttctgatgccgatttcgtcttgcaacccctcatcatg
gctcttgattcttcctctcctaaagttgttgaacctgcactcgattgctccttcaggttg
ttctccttgggcttgatccgctgcgagatcgacacccccactcctacccccagccccagc
cataacccaagttcccactcccacattttccgcctaatagattccgtctgtaagtgcggg
gctcttggggacgaagccatcgagctagctgtactcagggtcttgctctctgccattcga
tctccctacgtgcttgtcagaggtgattgccttgtccatattgttaggtcttgttacaat
gtctatctcgggggaatgaatggcaccaatcagatctgtgccaagtccgttcttgctcag
atgatgataattgttttcaccagagtggaggagaattccatgatagtggacttcaagacc
gtctctgtagctgaactcttggagttcacggatagaaatttgaacgagggaagctccata
cagatcgcccagaatttccttaatgagattgtggatgtcaagtccaaagaaggcattgct
gaatcaaagttgtgtttgcagttggagaatgacaacagtgaaaagaagggtgagctcatt
gatggagagccgggtgaaggagctgatctgagtggttatagtaagattagagaggatggg
ttcatgctcttcaagaatttgtgcaagttgtctatgaagttttcatcacaagagcacgca
gatgacaatattttgttaagggggaaagtactatcattggagctcctaaaggttatcatg
gataatgctggtcctatttggcgctcaaatgagaggtttcttaatgttatcaagcaattt
ttgtgcttgtcgttgttgaagaacagtgcactatctgtgatgacgatctttcaacttctt
tgttcaatattcaagaacttattatcaaaatatagatctgggttgaaatcagaaattgga
atcttcttccccatgctcatcttgcgtgtgctggagaatgtgcttcagcctagtttcttg
cagaagatgactgttttgggattgctggaggagatatctaaggatcctcagattatcatt
gatgtatttgtcaactatgattgtgatgtcgatgctcctaacatatttgagaggactgtt
aatggtcttcttaagactgctcttggtccgcctcccggttccactactacgctgtcccca
gtccaagatattacatttcgctctgaatctgtgaaatgcttggtcacaattattaagtca
atggggatgtggatggaccaacaattgaaggtaggagaccctaatcaagataaggtgtct
gatcatgaagtttcagaagcggctatcagcgttagtgaagagggtaacatagactatgag
ctacatccggatgcaaattctgaattttctggtgctgctgccttggagcaacgccgtgct
cataaattagaaatacagaaaggcgtttcactgttcaacagaaagccttcaaagggtatt
gatttcttaatgagcaccaaaaagattgggaattccccagaagatgtagcttcttttctg
aaaaacaccactgggttgaatccaaccatcattggtgattatctgggtgaaagagaggag
tttcctctgaaagttatgcatgcatatgttgattcttttaattttgaaggcatgaatttt
ggtgaatcaatcagatatttccttcgagggttcagattacccggtgaagctcagaagatt
gaccgtataatggagaagtttgctgagcgcttttgtaaatgcaatcccaactcttttacc
agcgcagatacagcttatgtgctagcttactctgtgataatgctcaatacagatgcacat
aatagcatggtgaaagataagatgacaaaagctgattttatccggaacaatcgagggatc
gacgacgggaaggatttacctgaagattatttgggtgctctttatgaccaaattgtgaga
aacgagataaagatgaaagcagattcttccgtgccacaaaacaagcaggggaatagtctt
aataagctgttgggcttggatggtatactgaatctagtatggaagcagagagaggaaaaa
ccactgggtgcaaacggagttctcgtgaggcatattcaagagcagtttaaagtaaaatct
ggaaaatctgagtctgtctattatgtcattgcagatccagctattttgagatttatggta
gaagtctgctggggtcccatgcttgctgctttcagtgtcaccctagaccagagtgatgat
aagaatgccacttctcaatgtttgctagggttcaggcatgctgtgcatattacagctgtg
atgggtatgcagacgcagagagatgcttttgtcacctctatggcaaagttcactaatctt
cattgtgcggccgatatgaaacaaaaaaatgttgatacaatgaaaacaataatgtcaatt
gccattgaagatgggaatcatcttcatgaagcgtgggagcatatattgacatgtctatct
cgatttgagcatctgcagttgctgggggagggagcgccatctgattcctccttttttact
tcctcgggctctgaatctgaggaaaaaacattgaagtcagctggatttccatctctgaag
aaaaaagggacactccagaatccaactgttgctgctgttgttagagggggttcatatgac
agtgctgctgttggagctaactctccaacattggtgactccagaacagataaataacttc
atttcaaacttgaacttacttgatcagatcggcaactttgaactaaatcacatatttgct
catagccaaaggctgaacagtgaagcaatagtagcatttgtcaaggccctttgcaaagtt
tcaatgtcagaactacagtctccgacagatcctcgtgtatttagccttacaaaaattgtt
gaagttgcgcactataacatgaaccgtatcagattagtgtggtcccacatatggagtgtt
ctttcagagttctttgtggctgttggtttgtcagaaaatctttcagttgcaatttttgtt
atggactcattacgacaacttgctatgaagtttttagaacgagaggaactggcgaactac
aactttcagaatgaatttttgagaccatttgttattgttatgcaacaaagtaattctgct
gaaatcagggagttgatagttcgttgtatttctcaaatggttctgagtcgtgtcaataat
gtaaaatctgggtggaagagtgtttttatggtttttacagctgctgctgcagatgaaagg
aagaatattgtgttgctggcctttgaaaccatggaaaagattgtacgggaatattttcgt
tatatcaccgagactgaagcattgacttttacggattgtgttagatgcctcatcaccttc
acaaacagcagattcaacagtgatgtcagcctcaacgctattgcttttctccgtttctgt
gctgtcaaacttgcagaagggggccttgttagcaatgagaaaaacaaaaataatgattca
tccattccagtggccgaaaaagaagcttcagatgggctaatcttcacagataaggatgac
tatatgtctttctgggagcctctgctcacagggttatcaagactgacttcagatcctcga
tcagctattagaaagagtgcattggaagttctgttcaacatcttgaaggaccacggccat
ctcttcccatgcctattctggattaatgtcttcaagtctgtaatctacccaatattcagt
ccagtaaatgatagcccagaagctgaagtgaaatatgaccagtcatttaaatccagatac
acaccaccagcagatggatgcttatgggactctgaaacttctgtggtggcagctcaatgt
ttggtggatttgtttgttaatttctttgatattgtgaggtctgaattgcctagtgtagtc
tctataatggtaggattcataaaaggttctggcaaggatcctgcagctactggggtagct
tctgtgatgcggttggcaggggatttgagaggcaaattctgtgaagaggaatgggaagtt
atctttctagctctgaaagaagcttcatattccactctacccaattttcagaagcttttg
agaacaatggacaacattgagatatctattagtgatatggaaacatcttctggggctgga
ttggtatatgatgaatcagatgatgacaacctgcatactgcgggatatgttgtttcaagg
atgaaggaccatatagcagctcagttgcgcatcatacaggtttcatctgatctctacaag
atgtgtcggcaatcaatatcagttgatactgtcactgtcctccttggaatctattcagct
atcacttctcatgctcagcaattgaaatctgagaaagttgtacaagtggagctgcaaaaa
gcatgttctatccttgagataccagaacctccgctggtaatttttgaaaatgagtcctac
cagaattacctcaatttcttgcatgagttgcttgtgagcaatccatcatttgtcgaagag
aagaatatagaaccagaacttgtgggtgtatgtgaagaaattctacgtgtatacttggaa
tgtgctgggttgaactctgtcaagaagaaaccagatgataaagcaatataccagtggaat
cttcccttgggatcagcgaagaaggaagaactggtagcaaggactcccttggttctgtca
gtactacgcattctgtgcagttggcaaatggattcttttaggaagtacatttctcagttg
ttcccattaatgatagatcttgttcggagtgagcatagctctggagaggtccagattgaa
ctaagccattttttccaatcctgtatcggtcccattattatgaaattgtga
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integrated database retrieval system
