Solanum lycopersicum (tomato): 101260393
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Entry
101260393 CDS
T02665
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101260393
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101260393
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
101260393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
FANCL_C
DUF116
PPL5
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
101260393
NCBI-ProteinID:
XP_004250440
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All DBs
Position
11:809831..810976
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AA seq
210 aa
AA seq
DB search
MENFHHSRRLLREVAAVVPPPMPAGITSPETIDDLQIGKNVNTFDANVIMVLAVFVSAII
CSLVLNSIIKCFFRCSTLVLIDSYSNHTNPSSTNKGIKKKALKTFPIVRYTTELKHLGLD
SECVICLSEFIVGDKVKVLPKCNHGFHVKCIDKWLNSHSSCPTCRHCLIETCQKIVNGDN
FVTTNAISSSTVEEIVTRIEPLEREGVISN
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggagaacttccaccactcaagaagattactccgggaggtggccgccgtggtgccgcct
cctatgccagccggaataactagccccgagacaattgatgatctacaaattggaaaaaat
gtcaacacatttgatgcaaatgttattatggtgttagcagtatttgtaagtgccataatt
tgttcacttgtgttgaactccatcataaaatgtttctttaggtgctctaccctagtttta
atagactcatactcaaaccatacaaatccttcatcaaccaataaagggatcaagaaaaaa
gcactcaagacatttccaattgtaagatacactactgaattgaaacatctagggctcgac
tctgaatgtgtcatttgcttatctgaattcattgttggagataaagttaaggttctacca
aagtgtaaccatggattccacgtcaagtgtatcgataaatggctcaattcacattcttct
tgtcctacttgtaggcattgcctcattgaaacttgtcaaaaaattgtcaacggtgacaat
tttgttactacaaatgcaatttcatcatcaacagttgaagaaattgtaacaaggattgaa
cctctagaacgtgaaggtgttatatctaattaa
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