Solanum lycopersicum (tomato): 101260394
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Entry
101260394 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K14830
protein MAK11
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101260394
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101260394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR41
Beta-prop_TEP1_C
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Cytochrom_D1
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Nucleoporin_N
Beta-prop_SCAP
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
101260394
NCBI-ProteinID:
XP_004232823
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All DBs
Position
2:59678391..59681544
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AA seq
337 aa
AA seq
DB search
MSLIAGSYERFIWGFKLRSLKNDQNYELTPLFSFPSHLSPIKCTAVAGSAAVSGGADDTI
KIYDLSTCSEIGSLHHSATVTSLSFFTPSSFSFPRNLIAASEDGSVSIYDADPFVHLKTV
KVHRKAVNSICIHPSGRLALTVGRDECMAMVNLVRGRRSFYCRLGKEASLVNFSDGGEKF
FMVMDDKISVHESEDAKAILELDSKKRVLCATYGMHGILFTGGEDRSIKAWDITSGKLAY
SIEDAHSTRVKGIVVLHKNSDGDAEDHQHIVASASSDGVIRVWDVRMTNKDKPNPLAEVN
TKSRLTCLAGSSIKSMKRPQVGNTTSNGQQLDAGEES
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaattgcaggttcatacgagagattcatttggggattcaagttgagatccctc
aaaaacgatcagaattacgaactaacccctctattctccttcccttcacatctctcacca
attaaatgcaccgccgtcgccggttctgccgctgtatccggcggcgccgatgacactatc
aaaatctatgacctttctacttgctcagaaattgggtcactacaccactccgccaccgtt
acttcactttccttttttaccccttcttcattctccttccctcgtaaccttattgccgcg
tctgaagatggttcggtttccatatatgatgctgatccttttgttcatctcaagacggtt
aaagtgcatcgtaaggcagtgaattctatatgcattcatccgtcggggaggttggcattg
actgttggaagagatgaatgtatggctatggttaatttggttagaggaaggagaagtttt
tattgtaggttgggaaaagaagcttctttagttaattttagtgatggtggtgaaaagttt
tttatggttatggatgataagatttctgtacatgaatctgaagatgccaaagctattcta
gagcttgacagtaagaagagggtgctttgtgccacttatgggatgcatggtattttgttt
actgggggagaggaccggagtattaaagcttgggacattactagtggaaaacttgcatat
agcattgaagatgcacattctacccgtgtgaaaggcattgttgtgctacacaaaaacagt
gatggtgatgctgaagatcatcaacacatagtagcatcagcatcatcagatggggtcata
cgtgtttgggatgttcgcatgactaacaaagataagccaaatccactggctgaggtcaat
acaaaatccaggctgacttgtctggctggatcatccatcaaatctatgaaaagaccacag
gttggaaatactacttcaaatggacaacagctcgacgcaggtgaagaatcatag
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