Solanum lycopersicum (tomato): 101260416
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Entry
101260416 CDS
T02665
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101260416
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101260416
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GRP
PIP49_N
Motif
Other DBs
NCBI-GeneID:
101260416
NCBI-ProteinID:
XP_069144058
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Position
8:complement(2571452..2576241)
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AA seq
372 aa
AA seq
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MATLNPFDLLDDDAEDPSLLVAAQQLKAPVASGPAKKGPVQPAKPAAKLPSKPVPPSQAV
REARSDGQRGGGRGGPRGGGRGRGRGRGFNQDFAADENAFGSNNGFSGRYSAPENGESGK
VSERRGGYGGSRGGFYGGRRGGFNNGDAADGEIERPRRVFDRRSGTGRGNEYIKREGSGR
GNWGTTADDIALETEVPVVDGEKIVEAEKQTGQEDAGDDNKDSTAAELEEKEPEEKEMTL
EEYEKVMEEKRKALVALKQEERKVNLDKELQSMQLLSNKKNDDEIFIKLGAEKDKKKEAV
EKAKKAQSINEFLKPAEGESYYRPGGRGRGRGRGRGNGGGYGGISSVSAPSIEDVGQFPS
LAVKKGRQSCMD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggctactttgaacccattcgaccttttggatgatgatgctgaggacccaagtttgcta
gttgctgctcagcagctaaaggctcctgttgcatctggaccagccaagaagggtccagtt
cagcctgctaagcctgctgctaagttgccctccaagccggttcctccttcacaggctgtg
agggaagccaggagtgatggccagagaggaggaggccgcgggggtccacgtggagggggc
cgtggtcgtggacgtggacgtgggtttaaccaagactttgctgctgatgagaatgctttt
ggcagcaataatggattctctgggaggtacagtgctccagaaaatggagaatcaggaaag
gtctctgaaaggagaggtggatacggtggatctcgtgggggcttctacggaggtcgtcgt
ggtggtttcaataatggtgatgctgctgatggagaaattgaacgcccaaggagagtgttt
gatcgacgaagtggcactggccgtgggaatgagtatattaaacgggagggctctggtcgt
gggaattggggaactactgcagatgatattgcactggagactgaagtacctgttgttgat
ggtgagaagattgttgaggctgagaaacaaactgggcaggaagatgctggagatgacaac
aaggattctactgctgctgagctagaagagaaggaacctgaggagaaggagatgaccctc
gaggagtatgagaaggtaatggaggagaagaggaaggctttggtggctctaaagcaggag
gaaagaaaggttaatttggacaaagaacttcaatccatgcaacttctctcaaacaagaag
aatgatgatgagatcttcatcaaattgggtgctgaaaaagataagaaaaaggaggcagtg
gaaaaagccaaaaaggcccaaagcataaatgagtttctaaagcctgctgagggtgaaagt
tactaccgccctggtggccgtggtaggggccgcggccgcggaagaggtaatggtggtgga
tatggtggaatcagcagtgtttcagccccatccattgaagatgttggtcaattcccctcc
ttggctgtcaagaaagggaggcagtcctgcatggattag
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