Solanum lycopersicum (tomato): 101260438
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Entry
101260438 CDS
T02665
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101260438
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101260438
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
101260438
NCBI-ProteinID:
XP_019069368
UniProt:
A0A3Q7GNE5
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Position
5:64857046..64865727
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AA seq
684 aa
AA seq
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MKNTIGWKRQLQHLVLWFFAVVFHLFLLVNGSRTDYFRHTPLRNSQKLSSTTPPVKLLIS
SNYVVMDNGIVKVNLTNPTGSIAGVSYNGIDNVLETDFKDTNRGYWDTVWERPGDKDHTF
DMLLGTKFRVIASDKNKVEVSFTKTWNPSNNGTTHDLPLNIDKRFVMLRGSSGFYSYGIF
EHLKGWPSLILEEARIAFKLKRTLFHYMAISDDIQRMMPTDEDRSDGQILDYREAVRLTN
PSNPKLKGEVDDKYQYSFENKDIKVHGWVCNTPHVGFWVITPSYEDRNGGPTKLDLTSHA
GPTSLAIFFSGHYAGPELGVKIKEGEPWKKVFGPVFFYLNSNSGNNHPTLWEDAKRQMED
ETAKWPYDFPESIDYPHANERGTIRGQLFVRDRYINKNPVYAKSAYIGLALPGHVGSWQY
ETKGYQFWIQTDETGHFNITSVRPGTYNLYSWVPGIIGDYKYNYDIIVKQGSDINLGNLI
YDPPRYGPTLWEIGIPDRSAGEFFVPDPLPALTNQLFNNTTQKFRQYGLWDRYTDLYPNK
DLAYKVGVSDYSKDWFFAHVTRRTRSKNYIPTTWQISFKLPSVDPKGTYTLRVALASATY
SHLQGRINNPSRTMPHFETPSIGRSNAIARHGIHGLYWLFNFKIQGLHLQKGENTIYLKQ
IKGGNPFYGHQYDYIRLEGPPQQN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatacgatagggtggaagaggcaactacaacatcttgtattatggttttttgca
gttgttttccatcttttcttgcttgttaatggttcaagaacggactattttaggcatact
ccactaagaaatagtcaaaagttgtcatcaactactcctcctgtcaaactgcttatctca
agtaattatgtggtgatggataatggcattgtcaaggttaacctaactaatcccactgga
tccattgctggggtgagctacaatggtattgataatgtactagagacagacttcaaagat
acaaatagaggatattgggatacagtgtgggaacgtcctggagacaaagatcacactttt
gatatgcttttagggacaaaattcagagtcattgctagtgacaaaaataaagttgaagtt
tcttttacaaaaacatggaatccttcaaataatggtactacacatgatcttcctcttaac
attgacaaaaggtttgttatgttgaggggaagttctggattttattcatatggaatattt
gaacacttgaaaggctggccaagcctaattcttgaagaagccagaattgcctttaagctc
aaaaggacactgttccattatatggcaatatcagatgatattcaaaggatgatgccaact
gatgaagatcgatctgatggacaaattcttgactatagagaagctgttagactaacaaat
ccatcaaatcctaaattaaagggagaggtggatgataagtaccaatattcatttgagaat
aaggatataaaagtacatggatgggtttgcaatactccacatgtaggattttgggttata
acacctagttatgaagatcgtaatggtggacccaccaagcttgatcttacttctcatgct
ggtcccacctctttagcgatatttttcagtggtcattatgcagggccagagttgggagtc
aaaataaaagagggagagccatggaaaaaagtttttgggcctgtttttttctacctcaac
tctaattctggtaataaccaccctacactttgggaagatgctaaaagacagatggaagac
gaaactgcaaaatggccatatgatttcccagaatctattgattatcctcatgctaatgaa
cgtggtacaattagaggtcaattattcgtacgagacaggtacataaacaaaaatcctgtc
tatgcaaaatcagcatatattggattagcacttcctggacatgttgggtcatggcaatat
gagactaaaggttatcaattttggattcaaacagatgagactggacacttcaatattact
agtgttagacctggaacttataacttgtattcttgggtccctggaattattggagattac
aaatacaactatgacattattgtcaaacaaggaagtgatataaacttaggtaacctaatt
tatgatcctccaagatatggtccaactttatgggaaattggaattcctgataggagtgct
ggagaattttttgtgcctgatccattgcctgccctaacaaatcaattattcaacaatact
acacaaaaatttaggcaatatggtttgtgggatcgatacactgatttatatccaaataaa
gatttggcgtataaagttggtgttagtgattatagtaaagattggttctttgctcatgta
accaggagaactagaagcaagaattatataccaacaacatggcaaatttcatttaaactc
ccaagtgttgatccaaagggaacttatacactacgtgtggcactggcttctgcaacctat
tcccatttacaggggaggatcaacaacccctcaagaacaatgcctcactttgaaactcca
tcaattgggaggagtaatgctatagctagacatgggatacatggattatattggctcttc
aattttaaaattcaaggattacatctacaaaagggagaaaatacaatatatttaaagcaa
ataaaagggggtaatcctttctatggccatcaatatgactatattcgtttggaaggacct
ccacaacaaaattaa
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