Solanum lycopersicum (tomato): 101260634
Help
Entry
101260634 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101260634
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101260634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
DUF5647
Motif
Other DBs
NCBI-GeneID:
101260634
NCBI-ProteinID:
XP_010319233
LinkDB
All DBs
Position
4:complement(5336065..5346995)
Genome browser
AA seq
685 aa
AA seq
DB search
MKKVWWKRKWSYFLGLLGIFLQLFLLINECAATRRINEKNIPLDLQTYPPVKLIRLNKHV
LVDNGLFSITFSVPDGMVVNIKYNGIDNLLENKNKENNRGYWDIVWNKAEKQGDIFDKLE
GTKFEVILQDENQVELSFTRTWKTLNSSSLSMNIDKRFIILRGSSGFYSYAIFERLEGWP
DIDVYQGRMAFKLNEKLFSYMAISDERQRIMPTAQDRAMGRQLDYKEAVLLTGPSTSFLK
GEVDDKYQYSVENKDNKVHGWISPSPKTGFWMITPSSEFQAGGPVKQDLTSHTGPIILSM
FFSTHYAGEIIGLRFRNGEPWKKVFGPVFIYLNSVPNEEDILTLWTDAKEQMLIETERWP
YEFPLSQDFVGADQRGIVCGRLLVNDSYMSKTLVTPNSTFIGLAAPGDVGSWQIENKGYQ
FWTQTNNEGYFFINNIIPGNYSLYAWVPGFIGDYKYKDYINITPGSRTRLQTLVYYPPRN
GPTLWEIGIPDRTAEEFFIPNPQPKLQNQLCIAHYEEKFRQYGLWDRYTEIYPNIDLIYT
VGSSNYQTDWFFAHVNKYIYKDNGDKTYIPTTWQIVFDLQEVKDFSNYTLQLALASSNEA
ELQIRINDQNPEHAPHFTTGSIGKDNAIARHGIHGLYRMYSIDIPSDLLTIGSNTMFLKQ
SRGSSSWSGIMYDYIRLEGPPQMSK
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagtttggtggaagagaaaatggagttattttcttggattgttgggaattttt
cttcagttatttttgctaattaatgaatgtgcagcaacaaggagaatcaatgagaagaat
attccattggatttgcaaacctatcctcctgtgaaattaattagactaaataaacatgtg
ttggtggataatggcctattcagcatcacattttctgtcccagatggaatggttgttaat
ataaaatacaatggcattgataatttattggaaaataaaaataaagaaaataatagaggg
tattgggatattgtttggaataaagcagaaaaacaaggtgacatttttgacaaacttgaa
gggacaaagtttgaagttatattgcaagatgaaaatcaagtagagctttcattcacaagg
acttggaagacattaaattcctcaagtctttctatgaatattgacaaaaggtttataatt
cttagggggagtagtggcttttattcctacgcaatttttgagcgtttggaaggatggcca
gatatagatgtttatcaagggagaatggcctttaagctaaacgaaaagttgttctcttat
atggctatttcagatgaaaggcagaggataatgcccacggcccaagatcgagcaatgggc
cgacagcttgactacaaagaagctgtacttcttacaggcccatctacttctttcctcaaa
ggagaggtggatgataaatatcaatactctgttgaaaacaaggataacaaggtccatggg
tggataagcccaagcccaaaaactggattttggatgattacaccaagtagtgagttccaa
gcaggtgggcctgttaaacaagacctcacttctcacaccggcccaataatattatcgatg
ttcttcagtacacattatgccggggagattatagggctcagatttcgaaatggagagcca
tggaagaaagtctttgggccagtttttatttacttaaactccgtgccaaatgaggaagac
attctaacactatggacagatgcaaaagaacagatgttaatcgaaaccgaaaggtggccg
tatgagttccctctttcgcaagatttcgttggagctgatcaacggggtattgtatgtggc
cgattactcgttaacgatagctacatgagtaaaacacttgtcactccaaattcaactttc
attgggttggctgcacctggagatgttggatcatggcaaattgaaaataagggttatcag
ttttggactcaaaccaataatgaaggatatttttttattaacaatatcatccctggaaat
tatagcttgtacgcttgggtccctggatttattggtgattacaaatacaaggactacatc
aacatcaccccaggatcaagaactaggttacaaactcttgtgtattaccctccaagaaat
ggtccaacattgtgggaaataggcattccagatagaactgctgaagaattcttcatccct
aatccacaaccaaaacttcaaaaccaattatgtattgcacattatgaagaaaagtttagg
caatatggattatgggatcgttatacagaaatataccctaatattgatttaatctacact
gttggatcaagcaactatcaaacagattggttctttgctcatgtgaataaatatatttac
aaggataatggggacaaaacatatataccaactacatggcaaattgtgtttgatcttcaa
gaagtaaaggatttctcaaattatactcttcaactagcattagcatcatcaaatgaagct
gaattacaaatccgaataaacgatcaaaatccagaacatgctcctcatttcacaacaggg
tcgataggcaaggataacgcgattgcaagacatggaattcatggattatatcgaatgtat
agtatagatatacctagtgatcttctaactattggaagtaatactatgtttcttaagcaa
agtagaggttcgagctcttggagtggaatcatgtatgattatattcgtcttgaaggaccc
ccacaaatgagtaaataa
DBGET
integrated database retrieval system
