Solanum lycopersicum (tomato): 101260643
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Entry
101260643 CDS
T02665
Symbol
ABCG39
Name
(RefSeq) pleiotropic drug resistance protein 1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
101260643 (ABCG39)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sly02000
]
101260643 (ABCG39)
Transporters [BR:
sly02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
101260643 (ABCG39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
ABC_trans_N
AAA_29
AAA_25
AAA
AAA_28
RsgA_GTPase
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
101260643
NCBI-ProteinID:
XP_004239865
LinkDB
All DBs
Position
5:complement(66923077..66930061)
Genome browser
AA seq
1413 aa
AA seq
DB search
MMEGANLNNFRGSLRASMRGNSSNSIFSRSGRDEDDEEALKWAALEKLPTFDRMRKGLLF
GKEGETISEVDTNDIGHQERKNLLDRLVKVADEDNEKFLLKLKDRIETVGIDLPSIEVRY
EHLNIAADAYVGSRALPTFINFMTNSVETFLNTIHILPSRKRQITILNDVSGMIKPSRLT
LLLGPPSSGKTTLLLALAGKLDPTLKVKGNVTYNGHELHEFVPQKTAVYISQHDLHIGEM
TVRETLEFSARCQGVGPRYEMLAELSRREKAANIKPDRDIDIYMKASVAKGQEANIVTDY
VLKILGLDICADTMVGDEMLRGISGGQKKRVTTGEMLVGPSKALFMDEISTGLDSSTTFS
IVNSLRQSVQLLKGTAVISLLQPAPETYNLFDDIILLSDAQIVYQGPREDVLDFFESMGF
KCPERKGVADFLQEVTSKKDQQQYWAKKDEPYRFITSKEFAEAYQSFHVGKKLADELKTP
YDKTKSHPAALSTKKYGIGMKQLLKVCADREFLLMKRNSFVFIFKFFQLMVMAFIMMSIF
FRTEMPRNNMDDGGMYAGALFFVVVVIMFNGMAEINLTILKLPVYFKQRDLLFYPSWAYA
LPTWILKIPITIVEVAIWTFLTYYVMGFDPNVSRLFKQFLLLVLVHQMASGLFRFIGAAG
RTMGVATTFGAFALVLQFALSGFVLSRNDVKKWWIWGYWISPLMYSVNSILVNEFDGKKW
DRIAPNGAESLGHAVLRSRGFFPDPYWYWIGVGALIGYIIIFNLGYSIGLAYLNPFGKPQ
AILSEDNETEQLIEGSETEGQDKKRGMVLPFEPHSITFDNIVYSVDMPQEIKDQGSTEDR
LVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDIKISGYPKKQATFA
RISGYCEQNDIHSPYITVYESLVYSAWLRLPQDVDKNKRKMFVEEVMELVELTPLRSALV
GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTV
VCTIHQPSIDIFEAFDELLLMKRGGQEIYVGPLGRYSCHLIKYFESLPGVSKIKEAYNPA
TWMLEVTAASQEMMLGVDFTDLYKKSDLYKRNKALIAELSTPRPGTTDLHFETQFSQSFW
TQCMACLWKQHLSYWRNPSYTAVRFIFTVILALVFGTLFWDLGSRLSRSQDLFNAMGSMY
AATLFLGVQNSSSAQPVVAVERTVFYRERAAGMYSALPYAFGQVIVEIPYVFLQAVFYGI
IVYAMIGFEWTVAKFFWYLFIMYFTLLYFTFYGMLTVAVSPNQNVASIIAAFFYALWNLF
SGFIVPRPRIPIWWRWYYWLCPVAWTLYGLVASQFGDLQTMLSDDENVEQFLGRYFGFEH
DFLGVVAAVIVVWPAVFAFLFAYAIKAFNFQKR
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggagcgaatcttaataattttagaggtagtttaagggcaagtatgagggga
aattcaagtaattcgatattttcgcgatcaggaagagatgaggatgatgaagaggctctt
aaatgggccgcgttagaaaaattacctacattcgatcgaatgagaaaaggtttattgttt
ggtaaagaaggtgaaactatttctgaagttgatacaaatgatattggacatcaagaaagg
aagaatttgcttgataggcttgttaaggttgctgatgaagataatgaaaagttcttattg
aaactcaaggatagaattgaaacagttgggattgatttgccatcaatagaagtgagatat
gaacatctaaacattgcggcagatgcatatgtaggaagcagagctttgcctacttttatc
aacttcatgaccaactctgttgagacattcttgaatactattcacatacttccaagtaga
aagaggcaaatcacaattctcaatgatgtaagtggtatgattaaaccttcaaggctaact
ctacttttgggacctccaagttctgggaagactactttgttattagctttggctggaaaa
cttgatcctacactaaaggttaaagggaatgtgacctataatggacatgaactacatgaa
tttgttccacaaaaaacagctgtttatatcagccaacatgacttgcatattggagaaatg
actgtaagggaaactttggaattttccgcaagatgccaaggagttggccctagatatgag
atgttggctgaactatcacgaagagagaaagctgctaatatcaagccagatcgtgatatt
gatatctatatgaaggcttcagtagcaaaaggacaggaagccaatattgttacagattat
gttcttaagattttggggctggatatctgtgctgatactatggtgggagatgaaatgtta
aggggtatttcaggggggcaaaagaaacgtgtgacgacaggtgaaatgcttgttggacca
tcaaaggcgcttttcatggatgaaatctcaactggattggacagttcaacaactttctcc
attgtcaattcgttaagacaatcggtgcagctcttgaagggaactgctgtaatatctctg
ttacagccagcccccgagacttacaacttgtttgatgacataattctgctgtcagatgca
caaattgtctatcagggtcctcgggaagatgttcttgacttctttgaatccatgggattc
aaatgccccgagaggaaaggcgtggcagatttcttgcaagaggtaacatcaaagaaggat
caacaacaatattgggctaagaaggatgagccttataggtttatcacatcgaaagaattt
gccgaggcatatcagtctttccatgttgggaagaaacttgccgatgagcttaaaactcct
tatgacaagaccaaaagccaccctgctgctttgtctactaagaagtacggtatagggatg
aaacaactgctgaaggtctgtgctgaccgagagtttctactaatgaagaggaactcattt
gttttcatattcaagttctttcagctcatggtgatggcatttataatgatgtccatcttt
ttccgtactgagatgccccgaaataatatggatgatggagggatgtatgctggtgctctc
tttttcgtagtcgttgtgattatgtttaatggaatggctgagatcaacctgacgatttta
aagcttccagtctacttcaagcaaagggaccttcttttttatccttcatgggcttatgcc
cttccaacatggattctcaaaatcccaataacaattgttgaagttgctatttggacattt
cttacatattatgtcatgggatttgatccgaatgtttcaagattgttcaaacagttcttg
cttctcgtactagtacaccagatggcatcgggactgttcagattcattggtgcagcgggt
agaacaatgggagtcgctacaacatttggagcatttgcactagttttgcaatttgcattg
tctggatttgtcctctcgagaaatgatgtgaagaaatggtggatctggggttactggatc
tcaccattaatgtattctgtgaattcaattcttgtgaatgaatttgatgggaagaaatgg
gatcgtattgcgccgaatggagctgagtcacttggacatgcagtactaagatctcgaggg
ttctttccagatccatattggtactggataggtgttggggcacttatcggatacataata
atcttcaaccttggctacagcattggactcgcttacctgaacccttttggtaagccacaa
gctatattatcagaagacaatgagactgaacaactcattgagggaagtgaaactgagggc
caggacaagaagaggggaatggttcttccattcgaaccacattctatcacttttgataac
attgtatactccgttgacatgcctcaggaaataaaagaccaaggttccactgaagataga
ttagtacttctaaaaggtgtgagtggagctttcaggccaggtgttctcacagctttgatg
ggcgttagtggagccggtaaaacaacactaatggatgtgttggccggaagaaaaacagga
ggatatattgatggtgacatcaagatttctggatatccgaagaagcaagcaacgtttgca
cgtatttctggatattgtgagcagaatgacatccattcgccttatattacagtttatgag
tcattggtttactcagcttggctgcgtttacctcaagatgttgataaaaacaagagaaag
atgtttgttgaggaagttatggaacttgtggagctaactcccttaagatcagccttagtc
ggattgcctggagtcaatggtctatcaacggagcaacgcaaaaggctgactattgcggtt
gaactggtagcaaacccctctatcattttcatggatgaaccaacttcagggttggatgca
agagctgctgccattgtaatgagagctgttaggaacactgtcgatacaggaagaaccgtt
gtctgtaccattcatcagcctagcattgacatttttgaagcctttgatgagctacttcta
atgaaacgaggaggacaggagatatatgttggtcctctaggtcgctattcttgtcatttg
atcaaatactttgagtcattgcctggagttagtaagataaaagaggcttacaatccagca
acttggatgttagaagtaacagccgcatctcaagaaatgatgttaggagttgactttact
gatttgtacaagaaatcagacctctacaagaggaacaaagccttaattgctgaattaagt
acgcctcgtcctggtacaacggatctgcattttgaaactcaattttcacaatctttttgg
actcaatgtatggcatgtctctggaagcaacatttgtcatactggcgtaatccatcttac
acagcagttagattcatcttcacagtcattctagcacttgtctttggcacattgttctgg
gatcttggtagcagattgagtcggagccaggatctttttaatgctatgggatctatgtac
gctgcaactctcttccttggtgtacaaaattcatcatcagcccagcctgttgtagccgtt
gaacgtactgtattttacagagaaagagctgctggaatgtattcagctttaccttacgcc
tttggacaggttatcgttgaaataccttatgtatttctacaagcagttttctatggtatc
attgtgtatgcaatgatcggattcgaatggactgttgccaagttcttttggtacctcttc
atcatgtacttcactctcttgtacttcaccttctatggcatgctgactgtggctgtttcc
ccaaatcaaaacgttgcttctataatcgcggccttcttctatgctctatggaatctcttc
tcaggattcatcgttcctcgacctcgtattccaatatggtggagatggtactattggctt
tgccctgtcgcgtggaccttgtatggtctcgttgcatcacaattcggagacctccaaact
atgcttagcgatgatgaaaatgttgaacaattcttggggcgttattttggattcgagcat
gattttctgggagtcgttgcagcagttatcgttgtatggcctgctgttttcgccttcttg
tttgcatatgccattaaggcattcaacttccagaaaagatag
DBGET
integrated database retrieval system
