Solanum lycopersicum (tomato): 101260644 Help Entry 101260644         CDS       T02665                                  Name (RefSeq) uncharacterized protein   KO K20178   vacuolar protein sorting-associated protein 8 Organism sly  Solanum lycopersicum (tomato) Pathway sly04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sly00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     101260644  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sly04131]     101260644 Membrane trafficking [BR:sly04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     101260644 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TPR_Vps8 Beta-prop_VPS8 TPR_Vps41 VPS8_N Clathrin TPR_VPS8_2 Beta-prop_EML_2 ANAPC4_WD40 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML WDR55 WD40_WDHD1_1st Beta-prop_RIG_2nd WD40 Beta-prop_HPS5 zf-RING_Vps41 WD40_Prp19 zf-RING_2 zf-C3HC4_2 zf_RING_Vps8 EIF3I Motif Other DBs NCBI-GeneID:  101260644 NCBI-ProteinID:  XP_004240296 LinkDB All DBs Position 5:complement(60267355..60284824) Genome browser AA seq 1908 aa AA seqDB search MELDLDSFLDSHADDDDDDHLLHHRTVDEILLNHSSSSSSSPSPPSSPSALHKRNDVDRR NRSAESSFQSLKLPLELHQTQSRAESISSKQSSEFSSPPAGQSVLPPFFSGVIRSNSKPG DALAAAFAASRSIPAPRAAAIKSKKASSEVLQRALESDESASIDPSACTDANISDKNLDT FGRTVFLHEIGSETIGLEGNIKDQFQAGQVQPSDTDNDSREVSTVDAGMDSINVSDAGDV SVVNDFSVKSNLNEALSYTGTQVESPSRIESDSVFHDSSGLDEIEDRQVQPLFGGEDNVV SADSSEEAGTKEILSSPVYETLSDEDLTKNDGAKLEHENVITQSKEGEVSSNGDETNSLN DAASIIDELVLQQESMRDSTNPKKNYHSALKPLELAEEAEKKQAFTAMHLEEGASAQPMR LDGVHRSSNVLGYFDVDENNTITQTLLSQAFRREHGSSQVLAVHLKYIAVGMSKGSILVM PSRYSSSHHADNMDAKMLIFGLSGDKSHAPVTCLSFNQQGDMLFAGYGDGHYTVWDVQRA SVLKVVTEHKAPVVHLLYLGQDSQVTRQFIVLSGDTKGVVNLDRFTVFPLFNRISLSKSQ ELLNESNSTTLCAVSLLSGESYGSAMVASQEGGSPSLIEEGVVILGTHQYALVAKLSPTF KVYAKIPRPDGAREGSMPYAAWKSESITTETYEKVSLLAIAWDRRVQVAKLVKSELKVCW RWTTDSSAVGLAWLDEQILVILTATGQLCLFSKDGNLIHQRSFSMDGSCGENLMSYHSYF SNVFGNPEKAHHNCLGVRGATLYILRPSQLVVSRLLSWKERVEVLHKAGDWTSALNMAMS LYDGQAHAVIDLPKNLDDVQKTLVPYLVQLLLSYVDEVFSYIAVTSGNPHGQPGQSNELK YDADFVNPDIKEQYTLVGGVSVEFCLHIKRLDVLFDEIFPKYVAVNHKDTFLELLEPYIL KDMLGSLPPEIMQALVEHYSTKGWLQRVEQCVLHMDMLSLDFNQVVRLCREHRLHGALIY LFNKGLDDFRTPLEELFLILRDSKRESAIALGYKMLVYLKYCFQGFAFPPGRGAFPSTRV PSLKRELLQFLLEEVSSPNSSTAMCLPYNVPNPNLLSLLEIDTEATLDVLRYAFVEGENE SYSPASNPADSKTETTEVNISTIEGISLVQKVVDVLAVILNLSYFQTGGTINNKDEICTD IWPTRKDTEYILDFISFLIASEKAKVSKDTLCQIFEYLTLGNETYTNVSGRIVETFNRKQ KQLSALLEVLPEEDWDAHYLLNLCERAQLHQVCGLIHAITHQYLSALDSYMKAVDEPILA FVYVDDMLRQLRGKEYDDFRSAVISRIPDLLKLNREGTFFLIVNHFGEESDYILSQLQAN PESLFLYLKTLIEVHSTGTLNFSSLRKLDASDFPSGRNKKHMSSEVYLEALSDLPKLLQN YPIHITDEMTELYIELLCRYERKSVLRFLETSESYRVERCLHLCQEYGVIDAAAFLLERV GDIGSALLLVISSLSDKFILLDTAVESEHCATAPEHFKAILSKKEVTDIIEILRTCIGLC QRNSPRLDSDEAESLWFQLLDSFCEPLMDSHDHMIRYKEDECVQEGKRACKIQWKVSKSH RNAHILRKLLSVFIKEIVEGMIGYVSLPRIILKLLSDNETQEFGDFKPTILGMLGTYDFE RRILDTAKSLIEDDTYSSLSLLKRGASHGFAPRNLLCCICNCPLTKDFSASSIQIFTCGH ATHQQCEPQESEASIRGNSTGCPICMPRKNSEKLRSKSMLVENGLVKSISKSHQTNGTTG LYPHENDGFDNSYGLQSVSRFDLLLNLQKTHQSMQLENIPQLRLAPPAVYHEKVKKRNIP SAGESSNGLAKPEKPSRSKHLRDVKLKGSSLRFPLKTNIFGKEKNIKL NT seq 5727 nt NT seq  +upstreamnt  +downstreamnt atggagcttgacctggattcatttttagattcacatgctgacgatgatgatgatgatcac ttactgcatcatcgcactgttgatgaaattctcctcaaccactcttcctcttcttcttct tcgccttctcctccttcttctccatctgctttgcataaacgcaatgatgtagatcgtcgc aatcgctcggcagaatcatcttttcaatccttaaaactgccattagagttgcatcagaca cagtcaagagcagagtcaattagtagtaaacaatcgagtgaattttcttcaccaccagca ggtcagagtgtgttgccaccatttttcagtggggtcatcagatcaaattcaaaaccggga gatgccttggctgcggctttcgctgcatcccgctccattcccgcgcctcgtgcagcagcc atcaaatccaaaaaagcaagctccgaagtgctgcaaagggccttggaaagtgatgaatcg gcttccatagatccttcagcttgcactgatgccaacatttctgacaaaaatcttgatact tttgggcgcacagtgtttttacacgagattggttctgagactattggtttggaaggtaac ataaaggatcagtttcaagctggtcaagttcaaccaagtgatacagacaatgatagtagg gaggtatctacagtggatgcaggtatggacagtataaatgtttctgatgcaggtgatgtt tctgtggtgaatgatttttcagttaaaagtaatttgaatgaagctctaagttatactgga actcaagtggaatctcctagtagaattgaatcagactcggtttttcatgatagctctggg ttggatgagattgaagatagacaagttcaacctttatttggaggtgaagataatgttgta agtgcggatagcagcgaagaagctggtactaaggagatactctcttctccagtctatgag actctttctgatgaagatttgactaagaatgatggtgcaaagcttgagcatgaaaatgta attactcaatccaaagaaggagaggtcagttccaatggagatgaaactaattctttaaat gatgctgcaagtatcattgatgagttagttttacagcaggaaagtatgagggatagtaca aatccaaaaaagaattaccattctgccttgaagcccctagaattggctgaggaagctgaa aagaagcaggccttcacggctatgcatttagaagagggtgcttctgctcaaccaatgagg cttgatggagttcataggagttctaatgtcctgggttactttgatgtagatgagaacaat accatcacccaaaccctattatctcaagcttttaggcgtgagcatggatcttcacaggtc ctggcagttcacctcaaatacattgctgtgggaatgtccaaaggatcaattcttgtgatg ccaagcagatactcctcctcacatcatgcggataacatggatgctaagatgttgatattt ggattatcgggagataaatcccatgcccctgtaacttgcttgagctttaatcagcaaggg gacatgctctttgccggatatggtgatgggcattacactgtatgggacgttcaaagggcc tctgtgcttaaagttgtcactgaacataaagcaccagttgttcaccttttatatttaggg caagattctcaagttactcgacagtttattgtgctcagcggtgatactaaaggtgtagtt aacttagaccggtttacagtgttccccttgttcaatagaatctccctttcgaagtcgcag gaactgctaaatgaaagcaacagcactacattatgtgcggtgtcgctactatctggtgaa agttatggaagtgctatggtggcttctcaagagggaggcagcccttctttgattgaggaa ggtgtggtcatacttggcacacaccaatatgctctagtggcaaaattaagccccacattt aaagtttatgctaaaattccacgtcctgatggtgctagggagggttcaatgccctatgct gcttggaaatcagaaagtattactactgaaacatatgaaaaagtttcactgcttgcaatt gcttgggatcgaagagttcaggttgcaaagctggtgaaatctgagctaaaagtctgttgg agatggactacggatagctcagcagttgggctggcatggttggacgaacagattttggta attctcacagcaactggacagctttgtttgttttcaaaagatgggaatttgatccatcag agaagtttttctatggatggatcttgtggagagaatctcatgtcataccattcctacttc agcaatgtctttggaaatcctgagaaagctcatcacaattgtttaggtgtcaggggggca actttgtacattcttcggccatcccagcttgttgtttcacgccttctttcctggaaggaa cgtgtagaagttttacataaagcaggtgactggacgagtgcactgaacatggcaatgtct ctttatgatggtcaagcacatgctgttattgaccttccaaagaatttggatgatgtccag aagacccttgtgccatatcttgtacaattgctgttgtcatatgtagatgaggtgttctcc tacatagcagtgacatctggcaatccacatgggcagccaggccaatcaaatgaattgaag tatgatgctgactttgtgaatcctgatattaaggagcagtacactctggttggtggtgtt tctgttgaattctgtcttcatattaagagacttgatgttctctttgatgaaatttttcca aagtatgttgcagtgaatcacaaggatacatttttggaacttctggagccatatatattg aaagacatgctaggatctttaccacctgagataatgcaagcactagtggagcactatagc actaaaggttggttacagcgtgttgaacagtgtgttctccacatggacatgttgtccctg gatttcaatcaggttgttcgcctatgcagggagcataggctgcatggtgcattgatctat ttgttcaacaaaggccttgatgattttaggactccattggaagagctctttttaattttg cgcgatagcaaaagagaaagtgctattgctcttgggtacaagatgcttgtttacctcaag tactgcttccaaggttttgcttttcctccagggcgtggagcattcccttccacacgtgtg ccatctcttaaaagagagcttctgcaatttttgttggaggaagtgagctctccaaattct tcgacagcaatgtgcttaccttacaatgtaccgaacccaaaccttctctctctgttagag attgacacagaggctaccttggatgttttgcgatatgcatttgtagaaggtgaaaatgaa agttacagtcctgcatcaaatccagccgattcaaagacggaaacaactgaagtaaacatt tcaactattgaaggcataagcttagttcagaaagtagtagatgtccttgcagtcattctt aatctgagttatttccaaactggtggtaccattaacaataaagatgaaatatgtactgac atttggcctacaaggaaagataccgaatacatattagattttatttcctttttaattgcc tctgaaaaagctaaggtttctaaagataccctttgtcaaatttttgagtacctgacactg ggtaatgaaacttacacaaacgtttctgggcggatagttgaaacattcaataggaaacag aagcaactgagtgcacttttagaagttttaccagaggaagactgggatgcgcactactta ctgaatttgtgtgagagggctcagctgcatcaggtctgcggcttaattcatgccatcaca catcagtatctttctgctctggacagttatatgaaagctgttgatgagcctattcttgct tttgtatatgttgatgacatgttgcggcaactgagaggcaaagaatatgatgatttcaga tcagcagtcatttctcgaatcccagatctactcaagttgaacagggaaggaacttttttt ctgattgtcaatcattttggagaggagagcgattacattttgtctcagctgcaggctaat ccagaaagtcttttcctttatctgaagactctcattgaagttcattcaacaggcacccta aacttctcttctttaagaaaactggatgcttcagacttccccagtggaagaaataagaaa catatgtcctctgaagtctacctggaagccttgtctgacttacctaaactcctgcagaac tatccaattcacataactgatgaaatgacggagctctatattgagctattatgtaggtac gagcgtaagtcagttctcagattcttggagacttccgaaagctacagggtggagcgctgc ttgcatttatgccaggagtatggagttatagacgcagcagctttcttgttagaaagggtt ggtgacatcggaagcgcccttttgcttgttatatcttcactcagtgataaatttatcctg cttgatactgctgttgaaagtgaacattgtgccacggctccggagcatttcaaagctatt ttaagcaagaaagaggtcactgacataatagagattttacgcacttgtattggactgtgc cagaggaacagcccccgattggactccgatgaagcagagagtctgtggtttcaattgctt gattctttttgtgagcctttgatggattcacatgatcatatgataagatataaagaagat gaatgcgtgcaagaaggcaagcgggcttgcaaaattcagtggaaggtgtcaaaatctcat agaaatgctcacatccttaggaaattgctctctgtgtttatcaaagagattgttgaagga atgattggatatgtaagcctcccgaggatcatattaaagcttctttcagataatgagaca caggaatttggtgatttcaaacctactatactggggatgcttggaacatatgactttgag aggcggattttggataccgctaaatcattgattgaagatgatacatattcctccttgagc ttactgaaaagaggagcttctcatggatttgcacctcggaacctcctatgttgcatttgt aactgtcccctcacaaaagatttctcagcttctagcattcaaatttttacttgtggtcat gcaacacatcagcaatgtgaacctcaggaaagtgaagcatcaattaggggtaactcaaca ggatgtcctatttgtatgccaagaaagaattcggagaagttgagaagtaaatctatgctt gtggagaatggattggtgaagtctatatcaaaatctcatcaaacaaatggtacgactggt ctatatccacacgagaatgatggttttgacaactcctacggacttcagtctgtttcaagg tttgacctcctccttaatcttcaaaaaacccatcagtctatgcaactagagaatatccct cagttgaggcttgcaccacctgctgtgtaccatgaaaaggttaagaaaagaaatattccc tcggctggagagagcagcaatggtctggcaaaaccggagaaaccaagcaggagcaagcat ctcagagacgtaaaactgaagggatcgtctttaaggttcccccttaaaacaaatatattt ggtaaagagaagaacattaagctgtga

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