Solanum lycopersicum (tomato): 101260805
Help
Entry
101260805 CDS
T02665
Name
(RefSeq) uncharacterized protein
KO
K17925
sorting nexin-13
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sly04990
]
101260805
Domain-containing proteins not elsewhere classified [BR:
sly04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101260805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
101260805
NCBI-ProteinID:
XP_010318539
LinkDB
All DBs
Position
3:65890838..65901601
Genome browser
AA seq
1132 aa
AA seq
DB search
MGTTQGQAVTVRDLVEEAKKRIVILLLCVIGLSYIMSLTSSSVFINLPAAALLIVMLRYL
SLDFDAQIKAATYKSKSSSLNNTVQKKQLDGPRSVNEKSDWRKKVDSPVVEDAIDHFTRH
IVSEWVTDLWYCRITSDRQGPEELVQIMNGVLGEISNRMRSINLIDLLTRDIVSLICTHL
ELFRTCKLRIEKKNTRSLTIEERDLELKLTLAADDKLHPALFSPEAEHKVLQHLMDGLIS
FTFRPEDLQCSLFRYIVRELLACVVIRPVLNLVNPRFINERIESLAISLKKADKGPTAAQ
TEQQSSPSVSEKVSADHFSGVLDSSAKGLELVQFRRNQTNDTTENNTMDNGNGSDLSKDP
LLSIDTRSTRSWSSLPSQTNTDDGRGLQKHRSGEWGEMLDLVSRRKTETLAPENLDNMWT
KGRNYKRKEEGNLASDSLQHNSLLGPPKSQEHLKGMLRQKESESENWVNVNHYLKANTQT
FQYQEEDEHNSDEVESESTSSYTTDDEEPISVTGLDSPGNKVWDAKNRRNINHIHHPLEN
NAGHKTRKGKASKGHIRSKHLNKVPSARKKSRASSQTEHVWQEIQRSSFLLGDGHDILNS
KYNEKPEVLSDHSDSEMPGRISSGTNASASSLSSSVLANQKMGANSLKSSIIADSFLKLT
CEVLSANIVKSGSKTFAVYCLSVTDVNNHSWSIKRRFRHFEELHRRLKEYPEYNLHLPPK
HFLSTGLDVQVIRERCKFLKEYMKKLLQLPSVSNSIEVWDFLSVDSQTYSFSNSLSIIDT
LPANLDDTVHKVNKEPLPKIGPRTDIIFSTAEHYAERKDRVLMHHPVVDESRYGKKYVTL
SPPKRPTKGAFEDSSNGSDNVQTNKVPIPATGTVLKSVETNSRASHGSSDTFVDSPVESS
LPLEWVPPQVSAPVLDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIGKIQR
LRRGSVVAAGIRRIEQILWPDGIFITKHPSRQRPTPSAIQSVGSPQNHPPTPSASPSIGS
PQNQPPTPSSSPMAEDIRKLDEKQQKEAEQRANLVYELMIEKAPAAVVGLVGHKEYEQCA
KDLYYFIQSSVCLKLLVLDLLELILLSAFPELDGVFNTLHQEKRKFGELKID
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccacccaagggcaggccgtgacggttcgggacctggttgaagaagctaaaaag
cggattgtaatcttgctcctatgtgtcattggactttcgtatatcatgtctctaacgagc
tcttcagtttttatcaacttgcctgcagctgctctcctaattgttatgcttcgctatcta
tctctggactttgatgcacaaataaaagctgctacatataaaagcaagtcatcctcatta
aataatactgttcagaagaaacagttagatggtccaagatcagttaatgagaaatctgat
tggaggaaaaaagtagattcacctgttgtggaagatgcaattgaccacttcaccagacac
atagtctctgagtgggtgacagatctctggtactgccgtataacttctgatagacagggt
ccagaggaacttgtgcagatcatgaatggcgtgctaggggaaatttcaaatcggatgaga
tccatcaatcttatagatcttttaacaagggatattgtcagtctaatatgcactcatttg
gaattgttccgtacatgcaaattgaggattgaaaaaaagaatacaagatccttgactata
gaagagcgagatctggaacttaaactgacgctggcagcagatgacaagttacatccggct
ttgttttctccagaagctgaacacaaggttctccagcatcttatggatggtctcatttcg
ttcacgttcagaccagaggacttgcaatgctctttattccgatacattgtgagggaactt
cttgcttgcgttgtgatacgaccagtactgaatttagttaaccctaggttcattaatgag
aggattgaatctctagctatttccttaaagaaggctgataaaggacctactgcagctcaa
acagaacagcaatcaagtccaagtgtatctgaaaaggtatcagcagatcatttttctggg
gtgttggattcttctgcgaagggtcttgaacttgttcagtttagaaggaaccaaactaat
gacactacggagaataatacgatggacaatgggaatggatcagatttgtcaaaggatcct
ttgctttcgattgatacacggtctactcgttcttggagttctttgccatcacaaaccaac
acagatgatgggagaggtctccagaaacaccgctctggagagtggggtgaaatgctagat
ttggtgtcacgtcgaaagactgaaaccctggctccagagaacttagacaacatgtggact
aaaggaagaaactataaaaggaaagaagagggcaatctagcatcagattcactccaacat
aattctttgctagggccacctaaatcacaggagcacttgaagggaatgctaagacagaaa
gagagtgagagtgaaaattgggttaacgtgaaccattatttgaaagctaatacccagact
tttcaatatcaagaggaagatgagcacaactcagatgaggtcgaatcagagagcactagt
tcttacactactgatgatgaggaacctattagtgtgacaggtcttgattctcctggtaat
aaagtgtgggatgccaaaaatagaaggaatatcaatcacattcatcatccacttgaaaat
aatgctggtcataagacaagaaagggaaaagctagcaaaggtcatattcgctctaagcac
ttaaataaagtaccatctgcgaggaaaaaatccagagcaagtagccaaacagagcatgta
tggcaagagattcaaagatcgagcttcttattaggggatggacatgatatattaaactct
aaatataatgagaaaccagaagttctgagcgatcactctgattcagaaatgcctggtaga
atttcaagtggcaccaatgcatcagcatcttctttgtcaagcagcgttctcgctaatcag
aaaatgggtgctaattctcttaaaagttctataattgctgattcctttttgaagttaacg
tgtgaggtcttgagtgccaatattgtaaagagtggctcaaaaacttttgccgtttattgc
ttatctgttacagatgtgaacaatcatagctggtccatcaaaagaaggtttcgtcatttt
gaggagctacacagacgtcttaaggagtatcctgagtacaatcttcatttgccacccaaa
cattttctctccacaggtctggatgttcaagtcattcgagaaagatgcaaatttcttaaa
gaatatatgaagaaactgctgcagctcccgagtgtttccaactccattgaggtttgggac
ttcctcagtgttgattcacagacatatagcttttcaaattccctttccataatcgataca
ttaccagctaacctcgatgatacagtacacaaagtaaataaagaacctctgcccaagatt
ggcccaagaactgatatcatattctccacggcagagcattatgcagaaaggaaggaccga
gtcttgatgcatcatcctgtggtggatgaatcaagatatggcaaaaaatatgtcacactg
tcccctccaaaaagacccaccaaaggagcttttgaggattcaagtaatggctccgacaat
gtacaaacaaataaagttccaatcccagccacaggaacggtgctaaaatcagttgaaact
aattcacgcgcctcacatggatcatccgatacctttgttgattctcctgttgaatcctcc
cttcccttagagtgggtgcctccacaggtaagtgcaccagttctagacctggttgatgtc
atttttcagctccaagatggtggatggatcaggagaaaggcattctgggtggcgaaacag
gttttacaattaggaatgggtgatgcatttgatgactggctcattgggaaaatccagcgt
ctgcgcaggggttcagtagtggctgcaggcattagacgtattgagcagattttatggcct
gatggaatattcataacaaagcatccaagtcgacaacgtcctacaccatctgccattcaa
tctgttggttctccacaaaaccatcctcctactccatctgccagtccatccattggttct
ccacaaaaccaacctcctactccatcatcatcaccaatggcagaggatatccggaaactg
gatgagaagcaacagaaggaagctgaacagcgtgcaaacctagtatatgagctgatgatt
gaaaaagcgcctgctgctgttgttggactagttggtcacaaggaatatgagcaatgcgca
aaggatctttattacttcatccagtcatctgtgtgtctaaagctgttagtccttgatctt
cttgagctgatactactgtccgctttcccggagctggatggcgtattcaacacattgcat
caagagaagaggaagtttggagagctcaaaatagattag
DBGET
integrated database retrieval system