Solanum lycopersicum (tomato): 101260911
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Entry
101260911 CDS
T02665
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly00040
Pentose and glucuronate interconversions
sly01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101260911
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101260911
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101260911
NCBI-ProteinID:
XP_004234910
UniProt:
A0A3Q7G8N0
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Position
3:complement(17557468..17561600)
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AA seq
504 aa
AA seq
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MSSQSLFYRAKMPPATPILLFIYLILSFFSPLIDSQLNLTLPNQHPYPESVVHQLHRRVN
ESRLLFQTIVRDSKCHSTGNPIDDCWQCDPNWAKDRQRLADCSIGFGQSAMGGKGGQIYV
VRDSSDRDTVNPIPGTLRHAVVQEEPLWIVFAADMVIKLKHELIINNYKTIDGRGANVHI
TGNGCITLQYVSHVIIHNVHIYNCVPSGNTNIRSSPTHVGWRGKSDGDGISIFGSHNIWI
DHCALSHCTDGLIDAIMGSTAITISNNYFSHHDDVMLLGHDDKYLPDSGMQVTIAFNHFG
EGLVQRMPRIRRGYVHVVNNDFTHWQMYAIGGSANPTINSQGNRYTAPDDPNLKEVTKRE
DTDNGQWDEWNWRTDGDTMVNGAFFVPSGQGLSNQYTKAYSVDPKSALLINQLTANAGVL
GGPRDNSISILPQVGGGTSEGSGRGHDQSNSGSVDLFGMIFSGTGASAAAPPTTTPILFS
FFILLTLYIITITTQLSKPFLHLL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccagagtttgttttacagggcaaagatgcctcctgccactcccattctctta
tttatctacctcattctctccttcttctcacctctaattgattcccaactcaatcttacc
cttccaaaccaacacccttatcctgaatctgttgttcaccaacttcacaggagggttaat
gagtccagattactattccagacaattgtaagagatagcaaatgtcacagtacaggaaac
ccaatagatgattgctggcaatgcgacccaaactgggccaaagaccggcaaaggctagca
gactgctccattggtttcggtcagagtgcaatgggtgggaaaggaggtcagatctacgta
gttagagactcctccgacagagacacagtcaacccaattccgggcacgctccgtcacgcc
gtagttcaagaggagcctctttggatcgtgtttgcagcagacatggttataaagctaaag
cacgagcttattatcaacaactacaagaccatcgacggacggggagcaaatgttcacatc
accggcaatgggtgtattacattacagtatgtgagccatgtgattatacataacgttcat
atttacaattgtgtcccttcgggtaatactaacatacggtcgagcccaacgcatgttggg
tggagaggcaaatcggacggtgatggtatatccatctttggatctcataatatctggatt
gatcactgtgcattatctcattgtaccgacggtttgattgatgcaatcatggggtctact
gctattactatatcgaataactattttagtcatcatgatgatgttatgctcttgggacat
gatgataaatacttgcctgattcaggaatgcaggtgacaattgcattcaatcatttcgga
gaaggattagtgcaaagaatgccaagaattagaagaggatatgtacatgtggtgaacaac
gatttcacacactggcaaatgtatgcaattggtggaagtgctaatcctaccattaacagt
caaggaaatcgatatactgctcccgatgatccaaatttgaaggaggtgacgaagcgggag
gacacagacaatgggcagtgggatgaatggaattggaggacggacggggacactatggtt
aatggcgcattttttgtgccttcagggcaaggccttagcaaccaatataccaaagcctac
agcgttgatcccaaatccgcccttctaatcaaccagctcaccgccaatgctggtgtcctt
ggtggccccagggacaatagcataagcatcttaccccaagtgggcggcggcactagtgaa
ggaagcggcaggggtcatgaccagtccaatagcggcagtgtcgacttgttcggaatgata
ttcagcggtactggtgcatctgcagcagcaccaccaacaaccacccctatcttattctcc
tttttcattcttctcactttgtacatcataactatcaccactcaattatcaaaaccattc
ttacacttgctatag
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