Solanum lycopersicum (tomato): 101261043
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Entry
101261043 CDS
T02665
Name
(RefSeq) DNA topoisomerase 1 alpha
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sly03032
]
101261043
Enzymes [BR:
sly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101261043
DNA replication proteins [BR:
sly03032
]
Eukaryotic type
DNA Topoisomerases
101261043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Fn3_PTPRU
Motif
Other DBs
NCBI-GeneID:
101261043
NCBI-ProteinID:
XP_010323847
UniProt:
A0A3Q7HDM5
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All DBs
Position
7:complement(62369271..62379322)
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AA seq
881 aa
AA seq
DB search
MAVEAFAKTNLMEDMDDDDDMPLVFKRSSTTSKQNQSNSSSQKQDGRSGRQVPDIRSPNG
QSSSTHKVKTVTSSKASPAVSPLTSPKASPLSSRTSPAPNSRPSSSAGNQAKNVNQQSNV
TPKESKQAVEPKSEPNDEAEDSDDDKLLSSRVPSGLSKSTSVHAKKVLCTSTSVQKSRPP
KKEDSDDETPLASRFPMKSNAGASTSKFSSSEEVKPKIRQNGLPSATVLSKRPPGEVKSA
AQASVKKPRLSDASTPVSSKQPPFKTEKKTEDDDDDVPISQRIKKAVDSASASASKVSYV
KKATKVVSSSMKKTKKKLKKPKYSKSSKLQPSSGDGQKWTTLEHNGVIFPPPYKPHGVKM
LYKGKPVDLTPEQEEVATMYAVMLDTEYMTKEQFKENFMNDWRKILGKNHVIQKLEECDF
TPIYEWHQSEKEKKKQMSSEEKKALREEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFR
GRGEHPKMGKLKRRIRPNDITINIGKGVPVPECPIPGQRWKEVRHDNTVTWLAFWNDPIN
PREFKYVFLAASSSLKGQSDKEKYEKARRLKDYIEGIRSAYTKDFASKDPVKRQIAVATY
LIDKLALRAGNEKDDDEADTVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVAVYEP
VFKAIQQFRSGKKGSDDLFDKLDTSKLNAHLKELMPGLTAKVFRTYNASFTLEQQLTKLT
QGGELADKIAVYNVANKEVAIICNHQRTVSKSHSVQISRLNNKIDELKAILEEFKVDLAR
AKKGKPPVKGADGKAKRNLTPQALQIKIDQTNVKIDNIERQIDTKEELKTVALGTSKINY
LDPRITVAWCKRHEVPIEKMFNKSLLAKFAWAMDVEPSFTF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggctgtagaggcttttgccaaaacaaatttgatggaagatatggatgatgacgatgac
atgcctttagttttcaaacgaagtagtaccacatcaaagcaaaatcagtccaattcatca
tctcagaagcaggatggaagatcggggcggcaagttcctgatatacgttcacctaatggc
cagagctctagtactcataaagttaagacagtcacctcttctaaggcatctccagcagtt
tcacctttaactagtccaaaagcgtcgcctctgtcaagcaggacatctcctgcaccaaac
tcaaggccgtcatcttctgcaggtaatcaggcaaaaaatgttaatcaacaatccaatgtt
actcctaaggagtcgaaacaagctgttgaaccaaaatctgaacctaatgatgaagctgag
gattctgatgatgataaactattgagttctagggtcccttctgggttatctaagagcact
tctgttcatgccaagaaagtgctttgtacttcaacatcagttcagaagtctagacctccc
aaaaaagaggattcagatgatgaaactcccttagcatcaaggtttccaatgaaatccaat
gcaggggcttccactagcaagttttctagttctgaagaagttaagcctaagattcgtcag
aatggtttgccatctgcgacagttttaagtaagagaccccctggtgaggtcaagtctgct
gctcaggcttcagttaaaaagcctagactttctgatgcgtccacacctgtttctagtaag
caaccgcctttcaaaactgaaaagaagacagaggacgatgacgacgatgttcctatatct
cagaggataaaaaaggcagtagattcagcttcagcttcagctagtaaagtgtcatatgtg
aagaaagcaactaaagttgtttcgtcatcgatgaagaaaacaaagaagaagttgaaaaaa
cccaagtactctaagtcgtcaaaactgcagccaagctctggtgatgggcaaaaatggact
acactggaacacaatggtgtgatttttccacctccatacaaacctcatggggttaagatg
ctctacaagggaaagcccgtggatcttactccagagcaggaagaggtcgcaacaatgtat
gccgtgatgttagacactgaatacatgactaaagagcagttcaaagagaatttcatgaat
gactggagaaaaatacttggaaaaaaccatgtcattcaaaagttagaagagtgtgatttt
accccaatatatgagtggcatcagagtgagaaggagaagaagaagcaaatgagttcagaa
gagaagaaggcattgagagaagagaaacttaagcaagaagagaaatacatgtgggctatt
gtggatggtgttaaagagaaggttgggaactttcgggttgaaccacctggattgttccga
ggccgtggggaacatccaaagatgggaaagctaaagagacggatccggccaaatgatatc
acaataaatattggaaagggtgttccagtaccggagtgccccatccctggccaaaggtgg
aaggaagtaaggcatgacaacacagtaacatggttagctttctggaacgaccctattaat
ccaagagaattcaaatacgttttcctagcagccagtagttccttgaaagggcaaagtgat
aaggagaagtatgagaaagctaggcgtttgaaggattacatagaaggcattagatctgca
tatacaaaagattttgcaagtaaagatcctgtgaagcgtcagattgcagttgcaacttat
cttatcgataaattagctctgagggcagggaatgagaaggatgatgacgaagctgataca
gttggttgctgtactttgaaagtagagaatgtagagccagtacctccaaatattttgaag
ttcgattttcttggtaaagattctatcaggtaccaaaatgaggtggctgtgtatgagcct
gtttttaaagctattcaacagttccgaagtggaaaaaagggcagtgacgatctttttgac
aagcttgatacgagtaagcttaatgcccatctaaaggaactcatgccagggctcacagca
aaagtatttcgtacatataatgcatcttttacattggagcagcaattgactaagctcaca
caagggggggagcttgctgataaaattgcggtatataatgtggcaaataaagaggttgca
ataatttgtaatcaccagcgtactgtctcgaagtcccatagcgtgcaaatttcaaggttg
aataacaagatagatgagttaaaggctattttggaagaattcaaagtagatttggctcgg
gccaaaaaagggaagcctccggtgaaaggcgccgatggcaaggcgaagaggaacttgacc
cctcaagcattacagataaaaatagaccaaactaatgtgaagattgataacatagagagg
caaatagatactaaagaagagttgaaaactgtggctttgggcacatcaaaaatcaactat
ttggatcctaggattactgtggcatggtgtaagcgccatgaggttcccattgaaaagatg
ttcaacaagtctcttctagcaaagtttgcctgggcgatggatgttgaaccttccttcaca
ttctaa
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