Solanum lycopersicum (tomato): 101261054
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Entry
101261054 CDS
T02665
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101261054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101261054
Spliceosome [BR:
sly03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101261054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Arc
Motif
Other DBs
NCBI-GeneID:
101261054
NCBI-ProteinID:
NP_001311443
UniProt:
A0A3Q7HUR2
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Position
8:complement(64393733..64397843)
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AA seq
483 aa
AA seq
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MATLADSFLADLDELSDNEADVIDEENLDVDQMEEDGDLADIEALNYDDLDNVSKLQKSR
RYVEIMQKVEDALEKESDVTNKGVVLEDEPEYQLIVDCNALSVDIENEIVIIHNFIRDKY
RLKFPELESLVHHPIDYARVVKKIGNEIDLTLVDLEGLLPSAIIMVVSVTASTTSGKPLP
EDVLQKTVEACDRALALDSAKKKVLDFVESRMGYIAPNLSAVVGSAVAAKLMGTAGGLSS
LAKMPACNVQLLGAKRKNLAGFSTATSQFHVGYIEQTELFQSTPPSLRMRACRLLAAKST
LAARVDSINGDPVGKTGRSLREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLR
KMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKV
AKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQALANQLGSGTQSTYFSDTGTFSKI
KRT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctggctgattctttcctggcagatctggacgagttgtccgataatgaagct
gatgttattgatgaggagaatcttgatgttgatcagatggaggaagatggagacttagca
gacattgaagcacttaattatgatgatctagacaatgtctccaagctgcaaaaatcacgt
cgctatgttgaaataatgcagaaagtcgaagatgcacttgagaaggagtctgatgtcacg
aataaaggtgttgttcttgaagatgaacctgagtatcagttgattgtagactgtaatgct
ttatcagttgacattgagaatgaaatcgttataatccacaacttcatacgtgacaagtat
cgattgaaatttcctgagttagagtcacttgttcatcacccgattgattatgcccgtgtt
gttaaaaaaattggaaatgaaatagatctgactcttgttgacttggaaggactcctaccc
tcagctattatcatggttgtgtctgttacggcatcaactacgagtggcaagccattgcca
gaagatgttttacagaagacagtggaagcatgtgatagagcccttgctcttgattcagca
aagaaaaaggttctcgattttgttgagagtcgaatggggtatattgctcctaatctttct
gctgtagttgggagtgcagttgctgcaaaacttatgggtactgctggtggtctctcatcg
ttggcgaaaatgcctgcttgtaatgtccagcttcttggtgccaaaaggaagaatttagca
gggttctccacagcaacatcccaatttcatgtgggttatattgagcaaacagaattattt
cagagtacacctccttccttaaggatgcgagcctgtagactgctggcagcaaaatctact
ttagctgcacgtgttgactcgatcaatggagacccggttggaaaaactggaagatctctt
agggaagagatacgtaaaaagatagagaagtggcaagagccacctcctgcaaagcagcca
aagcctcttccagttcctgattccgagcctaagaaaaagagaggtggccgtcgtctgaga
aagatgaaagaaagatacgctatcacggacatgcggaaactagcaaataggatgcagttt
ggaatacctgaagaaagctccttaggtgatggactaggagagggctatggcatgcttggt
caagctggaagtggtaaactgcgtgtgtcagttggtcagagcaagcttgctgccaaagta
gctaagaaattcaaggagaagagttatggaagcagtggtgctacatcaggcttgacttca
agtttggcctttactcctgtgcaaggtatcgagctatcaaatcctcaggcacttgcaaat
cagcttggcagtggaactcagagcacctatttctcggatactggaacgttttccaagatt
aagagaacatga
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