Solanum lycopersicum (tomato): 101261215
Help
Entry
101261215 CDS
T02665
Name
(RefSeq) notchless protein homolog
KO
K14855
ribosome assembly protein 4
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sly03009
]
101261215
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101261215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ASA1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_WDR41
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
CFAP251_N
NLE
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NOL10_N
Tricorn_2nd
WD40_RFWD3
Beta-prop_SPT8
PAC11
Beta-prop_HPS5
eIF2A
PD40
WDR54
Tricorn_N
TRM82_WD
RMC1_N
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Beta-prop_ELP1_1st
TibC_1st
Beta-prop_WDR11_2nd
DUF4747
Motif
Other DBs
NCBI-GeneID:
101261215
NCBI-ProteinID:
XP_004236242
UniProt:
A0A3Q7FS56
LinkDB
All DBs
Position
3:complement(59714671..59722500)
Genome browser
AA seq
485 aa
AA seq
DB search
MAETMEVEVEAAAAAEREATNSVICQLADPEGNPLGAALYLPENASPKELNQVVNKLLSN
EEKLPYAFYISDEELVVQLGSYLEKNKVSVEKVLTIVYQPQAVFRIRPVTRCSATIAGHT
EAVLSVAFSPDGRQLASGSGDTTVRLWDLNTQTPLFTCQGHRNWVLSVAWSPDGKHLVSG
SKAGELICWDLQTGKPLGNPLTGHKKWITGISWEPVHLSAPCRRFVSASKDGDARIWDVT
TRKCLICLTGHTLAITCVKWGGDGVIYTGSQDCTIKVWETTQGKLIRELKGHGHWVNSLA
LSTEYVLRSGAFDHTNKHFASPEEMKKVALERYNKMRGNAPERLVSGSDDFTMFLWEPAV
SKHPKTRMTGHQQLVNHVYFSPDGQWIASASFDKSVKLWNGTTGKFVAAFRGHVGPVYQI
SWSADSRLLLSGSKDSTLKVWDIRTKKLKQDLPGHADEVFAVDWSPDGEKVASGGKDRVL
KLWMG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaacgatggaagtggaagtggaagctgcggcggcggcagagagagaagcaacc
aacagtgtcatatgtcagttggctgacccagaagggaatccgttgggtgctgccttgtac
ctccctgaaaacgctagtccaaaagagcttaatcaagttgtcaataagcttctcagcaat
gaggaaaagttgccttatgcattttatatctcagatgaagagcttgtggtgcagcttgga
tcatacttagagaagaataaagtgtctgtggaaaaagtcttgaccatagtttatcaacca
caagcagtgtttcgaatccgccctgtcactcgttgttcggccacaattgctggtcatact
gaagctgttctttcagttgccttcagtcctgatggacgacagttggcaagtggatctggt
gacactacagttcgtttgtgggatctaaatacccagacaccgttgtttacatgtcaaggg
cacagaaattgggttctttctgttgcatggtcgccagatggtaagcatcttgttagtgga
agcaaggctggagaacttatctgttgggaccttcagactgggaagcctttagggaatccg
cttactggccacaagaaatggataactggtatttcttgggaacctgtacacctcagtgct
ccatgtcgccgctttgtaagtgcaagtaaagatggcgatgcacggatatgggatgttacc
acaaggaagtgtctcatttgtctcactggccatacacttgcaataacatgtgtaaaatgg
ggtggagatggagttatatacacgggatctcaagactgtacaatcaaggtatgggaaacc
acgcaagggaagctgatacgtgaattgaagggtcatggacattgggtaaattctctagca
ttgagcactgaatatgttcttcgaagtggagcttttgatcacactaataaacacttcgca
tctcctgaggaaatgaaaaaggtagcacttgaaaggtacaacaaaatgagaggtaatgcc
cctgagaggttggtatcaggatcagatgatttcacaatgtttctatgggagcctgctgtc
agcaagcacccaaaaactcgcatgacaggtcatcaacagctggttaatcacgtttatttt
tctccggatggtcaatggatagcaagtgcttcattcgataagtcagtaaaattatggaat
ggaaccacaggaaaatttgttgctgcattccgaggccatgttggacctgtttatcagata
agctggtcagccgacagtaggctacttttgagtgggagcaaagattcaaccttgaaggtt
tgggatatccggacaaaaaaattgaaacaagaccttcccggccatgctgacgaggttttc
gcggtcgactggagtccagacggcgaaaaagtagcatctggtggtaaagatagagttctg
aagctatggatgggatag
DBGET
integrated database retrieval system