Solanum lycopersicum (tomato): 101261334
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Entry
101261334 CDS
T02665
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101261334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101261334
03036 Chromosome and associated proteins [BR:
sly03036
]
101261334
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
101261334
Chromosome and associated proteins [BR:
sly03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
101261334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_WDR75_1st
Beta-prop_SCAP
Ge1_WD40
Beta-prop_IFT122_1st
RMC1_N
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_VPS8
WDR54
CFAP43_N
Motif
Other DBs
NCBI-GeneID:
101261334
NCBI-ProteinID:
XP_004241439
UniProt:
A0A3Q7HV84
LinkDB
All DBs
Position
6:47403504..47406561
Genome browser
AA seq
455 aa
AA seq
DB search
MDAGSLSSVSASKNKSRCPLQEQYLQKRNSRDNLDRFIPNRSAMDMDYAHYMLTEGRKGK
ENPAVDSPSREAYRKQLAETFNMNRSRILAFKNKPPTSVEGIPNDFSSSVHQQAKTAKPR
RYIPQTSERTLDAPDLVDDYYLNLLDWGSSNVLSIALGSTVYLWDASDGATSELVTVDEE
HGPVTSVKWAPDGRHIALGLNNSDVQLWDTTANRLLRTMRGGHRSRVGALDWNNHLLTTG
GMDGQIRNNDVRVRSPIVDTYQGHNQEVCGLKWSASGQQLASGGNDNLLHIWDRSMASSN
TSTEWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRSIKFWNTHTGACLNSIDTGSQV
CALLWNKNERELLSSHGFTKNQLTLWKYPSMVKTAELTGHTSRVLFMAQSPDGCTVASAA
GDETLRFWNVFGTPEVAKPAPKANTEPFAHLNRIR
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcattgagttctgtctcagcaagtaagaacaaatctcgttgccctctt
caggaacaatatctacaaaagagaaattctcgggataatttggataggttcattcctaat
cgttcggcaatggatatggactatgcacattacatgttgacagagggaaggaaaggtaag
gaaaatccagctgttgattctccctccagagaggcatacaggaagcagcttgcggaaaca
ttcaacatgaacaggtcccgcatattggcgttcaagaacaagccacccacttctgttgag
ggtattccaaacgacttctcatcatctgttcaccaacaggcgaagactgctaaaccgcgt
cgatacattcctcagacctctgaaaggacattagatgctccagatctagtggatgactac
tatttgaatttgttagattggggcagcagcaatgttctttctattgctctaggcagcact
gtatatctgtgggatgcatctgatggtgccacttcagaattggtcactgttgacgaagag
catggtcctgttacaagtgttaaatgggctcctgatggtagacatattgctcttggtttg
aacaattccgatgttcagctctgggatacaacggcaaatcggctgctgagaactatgaga
ggtggtcacagatcccgagttggcgctctagattggaacaatcacttattaacaactggg
ggcatggatggtcagatcagaaacaatgatgtgagagtgagatcgccaattgttgatacc
taccaaggacataaccaagaagtttgtggtttaaaatggtcagcctctggtcaacaatta
gctagtggtggaaatgataatctcctccatatatgggacaggtcaatggcttcttccaac
acatcaacagagtggcttcacaggcttgaagatcatacagctgccgttaaggcccttgct
tggtgtcctttccagggtaacttactagcctctggtggtggtggaggtgacaggtccatt
aagttctggaacacccatactggtgcttgcttgaactctatcgatacaggctctcaggtt
tgtgccctgctatggaacaagaacgaacgtgagctcctaagttcacatggtttcacaaag
aatcagctcactctttggaaatacccttccatggtaaagacagccgagctcactggtcac
acatccagagttctttttatggcacagagtccagatggttgcacggtggcatctgcagct
ggggatgaaactcttagattttggaatgtatttggtactcctgaagttgcaaagcctgca
ccaaaggcaaacactgagccatttgctcaccttaaccgtattcggtga
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