Solanum lycopersicum (tomato): 101261563
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Entry
101261563 CDS
T02665
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101261563
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101261563
Ubiquitin system [BR:
sly04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
101261563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING-like
zf-RING_4
FANCL_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
101261563
NCBI-ProteinID:
XP_004249864
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All DBs
Position
11:802642..803600
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AA seq
208 aa
AA seq
DB search
MDYSRRLLRGATMSPPPAAGISHDTPLGHRVNTIDANVIMVLAVLVCALICSLVLNSIIK
CAFKCSSLILADPSSNHTSNNNSSSTKLVNRGIKKKALKTFPVITYSTTEPKHPGLDSEC
VICLSEFGVGDKIKVLPKCNHGFHVRCIDKWLNSHSSCPTCRHSLIDTCEKIVNGGNSST
TNNNIREAAVQQVIVRIEPLQREGVISN
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggactattcaaggagattactccggggagccaccatgtcgccgccaccagcagccgga
atcagccacgatacaccacttggtcatagagtcaacacaattgatgcaaatgttattatg
gttttggctgtacttgtatgtgccttaatttgttcacttgtgttgaattccatcataaaa
tgtgcatttaagtgctctagcttaatattggctgatccatcatcaaatcatacaagtaac
aacaactcttcttccacaaaattagtcaatagagggatcaagaaaaaagcgctcaagaca
tttccagttataacatatagtactactgaaccgaaacatccggggctcgactctgaatgt
gtcatttgcttatcagagtttggagttggagacaaaatcaaagtgctacctaagtgcaac
catggattccatgttcgatgtattgataaatggctcaattcacactcttcttgccctact
tgtaggcactccctcattgacacttgcgaaaaaattgttaatggtggcaattcttctact
actaataataatattagagaggcagcagtacaacaagttatagtaaggattgaacctctc
caacgtgaaggtgtgatatccaattaa
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