Solanum lycopersicum (tomato): 101261566
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Entry
101261566 CDS
T02665
Name
(RefSeq) cold shock domain-containing protein 3-like
KO
K09250
cellular nucleic acid-binding protein
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101261566
Transcription factors [BR:
sly03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
101261566
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
CSD
zf-CCHC_4
zf-CCHC_5
OB_RNB
zf-CCHC_3
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
101261566
NCBI-ProteinID:
XP_004232496
LinkDB
All DBs
Position
2:complement(47622483..47623670)
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AA seq
260 aa
AA seq
DB search
MAVEASRMTGTVSKFSNPKGYGFIKPDDGSEDLFVHQSEIKSDGYRSLYEGQKVEFTMTV
KGDKYQAIDVTGPDGAPLDSGRNGRGNSNSRGGGGYGYGGDDGGYRRNGNDGGYRSAGEC
YNCGRTGHLARDCDRNSGGGGGGRGGCYNCGAAGHLARDCDRSSGGGGGGGGASGGVCYT
CGGYGHMARDCPSAGRVGGRGGGGSGACYSCGAQGHLARDCPGGGGSNFGRSGGGSGGSK
CYNCGEAGHFARECTSQSVN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaggcatccagaatgacaggaacagtttctaagttcagtaacccaaagggt
tacggtttcatcaaacctgatgatggatccgaagatctgttcgttcatcaatcagagatc
aaatctgatggctaccgttctctctacgaaggccagaaagtggagttcaccatgactgtg
aagggagataagtaccaggctattgatgtcactgggcccgatggcgctcctctcgatagt
ggccgcaatggcaggggaaatagtaacagtcgtgggggtgggggttacggttatggtggt
gatgatggtggttatcggaggaacggcaatgatggtgggtatcgtagcgccggtgagtgt
tataactgtggaaggacgggacatttggctagggactgtgatcgcaacagtggaggtgga
ggaggtggcagaggcgggtgttataactgtggtgctgctggacatttagctagggattgt
gaccgtagtagtggtggtggtggtggaggaggaggagcaagtggtggtgtctgttacact
tgcggtgggtatggccatatggctcgagattgcccgagtgctggacgtgttggcggccgt
ggtggaggaggtagtggggcttgttattcatgcggtgcacaaggacacttggctagagac
tgtcccggtggtggtggtagtaattttgggagatctgggggtggtagtggaggaagcaag
tgttacaactgtggagaggcgggccactttgctagagaatgcactagccaatccgtgaac
tga
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