Solanum lycopersicum (tomato): 101261662
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Entry
101261662 CDS
T02665
Name
(RefSeq) protein LATE ELONGATED HYPOCOTYL isoform X2
KO
K12133
MYB-related transcription factor LHY
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101261662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sly03000
]
101261662
Transcription factors [BR:
sly03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
101261662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
DUF5134
Motif
Other DBs
NCBI-GeneID:
101261662
NCBI-ProteinID:
XP_004248416
UniProt:
A0A3Q7IAI7
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All DBs
Position
10:324558..344956
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AA seq
762 aa
AA seq
DB search
MDPYSSGEELVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALTKGVPTSQALDIEIPPPRPKRKPSNPYPRKTSAAGHSSQVGAK
DGKYSTTFSSICEERNLFDLEKEPITEKPGGNEKLGNVKETQNKKNCSQGLTKEGASAAS
MSSGKSLQAHVAPTDVCAFSESVSVTKGVVNNDNANKSFLIVESKEHQQSEILDIRQSFQ
GNSSCNTFDGGKSCQSSEKLAQGEKKHPSFQPNHLGEFSRNDMQVLHNYPRHVPVHILDG
TNGSQIAPDMFNHESTSQQINGVPGLPNLYSNPASSTTSEHHSNAPQSSIHQSFSCFHPI
FTPIRDPDDYRSFFQLSSTFSSLIVSALLQNPAAHVAASFAASFWPYANMERPTDSPTDN
TASQINSAPSMAAIAAATVAAATAWWAAHGLLPLCSQFQSSFTCVPTSATSMQVDACQPR
VDKNEGREGTHDSPHVQEPVPECSEALQEQQSGSKLPPSLSSESEESEGRKLKTGLTATD
TEQGAAVTKINEPNAEKGGKQVDRSSCGSNTPSSSEIETDALEKDEKGKEEPQESNINLL
AGEAANRRYRNFISPTESWKEVSEEGRIAFQALFTREVLPQSFSPSLDLKNKGKIILEKL
KQKPDEKVQCGPQLDLNDMASNICSSHQTMEDNVLLIGNKEDVETCLPMIELGQVRLKAR
RTGFKPYKRCSLEANDSRVTSSNCQDEEKSSKRLRLEGEAST
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggacccttattcctcaggggaggaacttgttgttaagacaaggaaaccttatacaatc
actaagcaacgagagcgatggacggaggaggagcacaataggttcctagaagctttgaaa
ctttatgggcgtgcttggcagcgcatagaagaacacataggaactaaaactgctgtgcag
atcagaagtcatgcgcaaaagttttttacaaagttagaaaaggaggctcttacaaagggg
gtcccaacaagtcaagcacttgacattgaaattcctcctccacgacctaaaaggaaacca
agtaatccttatcctcgtaagacaagcgcagcaggtcactcatcacaggtgggagcaaaa
gatgggaaatattcgacaactttttcttccatctgtgaggaaaggaacttatttgacctg
gagaaagaaccgattactgagaaacctggcggaaacgagaagctgggcaatgtaaaagaa
acccagaacaagaaaaactgctcccaagggttaactaaggaaggtgcttctgcagcctct
atgtcttcaggaaagtccttgcaagcacatgtggcacctacagatgtgtgtgcctttagt
gagtctgtgtctgtcaccaaaggagtggttaacaatgataacgcaaataaatcttttctc
attgttgaatccaaagaacatcaacagtcagaaatactcgatatcagacagtcctttcaa
ggtaacagctcctgtaacacctttgacggggggaaatcttgccagtcgagtgaaaagttg
gcacaaggtgagaaaaaacatccatcgtttcagccaaaccatttgggggaattctcaaga
aatgatatgcaagtgctacacaactatccaagacatgtgccagtgcatattcttgatgga
acaaatggttctcaaatagccccagatatgtttaatcatgaatctacgagtcagcagata
aatggggtcccggggctcccaaatttgtattctaaccctgcttcatccaccacatctgag
caccacagtaacgctccacagtcatccattcatcagtcattttcttgtttccaccccatt
ttcacccctattcgtgatccagatgattaccgatcgttttttcaattatcctccaccttc
tccagccttattgtttctgctttattgcaaaacccagcagcacatgtcgcagcaagtttt
gccgctagcttttggccttatgcaaatatggaacgtccaacggattctccaactgataac
accgctagccagattaactcagctcctagtatggcagcaattgctgctgccacagtagca
gctgcaactgcatggtgggcagcccatgggctcttaccattgtgctctcaatttcaaagc
agttttacctgtgttcctacatcagcaacatcaatgcaagtggatgcctgtcaacctaga
gtagacaagaacgaaggaagagagggaactcatgattctccccatgttcaggaacctgtc
ccagaatgctctgaagctttgcaagaacaacaatcaggttctaagttgccaccttctcta
tcatcagaatcggaggagagtgaaggtaggaagctaaaaactgggttaacggccactgat
actgagcaaggagctgcagttactaaaattaatgagccaaacgcagaaaagggcgggaag
caggtagatcgctcttcctgtggatccaacacaccttcaagtagtgaaattgagacagat
gctttggagaaggatgagaaaggtaaagaagagccccaagaatctaatattaaccttcta
gctggagaggctgcgaatcggcgttatagaaatttcatcagtccaaccgaatcttggaaa
gaagtctccgaagagggacggatagctttccaggctcttttcaccagagaagtgttgcct
caaagtttttctccttcacttgatctgaaaaataagggaaagatcattcttgaaaagttg
aagcaaaagccagacgagaaagttcaatgtggaccgcagttagatcttaatgatatggca
tccaatatctgttccagtcaccaaacaatggaagacaatgtgttattaattggcaacaaa
gaagatgtagaaacatgcctaccaatgatagaacttggacaagtaaggttgaaagctcgc
cgtactggatttaagccttacaagaggtgctcattggaggcaaatgatagcagggtgaca
agttctaactgtcaggatgaagaaaaaagctcgaaaagacttcggttggaaggagaagct
tctacttag
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