Solanum lycopersicum (tomato): 101261716
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Entry
101261716 CDS
T02665
Name
(RefSeq) NEDD8-conjugating enzyme Ubc12-like isoform X1
KO
K10579
ubiquitin-conjugating enzyme E2 M [EC:
2.3.2.34
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101261716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sly04121
]
101261716
Enzymes [BR:
sly01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.34 E2 NEDD8-conjugating enzyme
101261716
Ubiquitin system [BR:
sly04121
]
Ubiquitin-conjugating enzymes (E2)
UBL-conjugating enzymes
101261716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UQ_con
UFC1
UEV
RWD
Motif
Other DBs
NCBI-GeneID:
101261716
NCBI-ProteinID:
XP_019069896
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All DBs
Position
6:complement(1526202..1529451)
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AA seq
183 aa
AA seq
DB search
MINLIKVREKQKEAAENAGSKTPIKEQTASKLRVHRDISELTLPSICTIEFPNGKDDLMN
FEVSIKPDEGYYHDGEFPFKFEIPILYPHDAPKVKCKIKVYHPNIDYDGNVCLNILREDW
KPVLNINAVIYGLIHLFTEPNHEDPLNPEAADELRDNPRSFESHVRSAMWGESVHGLTYD
RIL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttaatcaaagttcgagaaaaacaaaaagaagcagctgaaaatgcaggatca
aaaacaccaattaaagaacaaacagcctcaaaattacgtgtccatagagatattagtgaa
ttaaccttaccatcaatttgtacaattgaatttccaaatggtaaagatgatcttatgaat
tttgaagtttcaattaaacctgatgaaggttattatcatgatggtgaatttccatttaaa
tttgaaattccaatactttatccacatgatgcaccaaaagttaagtgcaaaatcaaagtt
tatcatccaaatattgattatgatggtaatgtttgtcttaatatacttagagaagattgg
aaacctgttttgaatattaatgctgtgatttatggcttaatccatttgtttactgaacct
aatcatgaagatccacttaatcctgaagctgctgatgaattaagagataatccaagatca
tttgaatcccatgttaggagtgctatgtggggagaaagtgtgcatggattgacttatgat
cgtatactataa
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