Solanum lycopersicum (tomato): 101261719
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Entry
101261719 CDS
T02665
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3 isoform X1
KO
K03255
protein TIF31
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sly03012
]
101261719
Translation factors [BR:
sly03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101261719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_9
PAM2
TPR_1
TPR_8
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101261719
NCBI-ProteinID:
XP_004241691
LinkDB
All DBs
Position
6:44734673..44745628
Genome browser
AA seq
1719 aa
AA seq
DB search
MAPRSGRGKGNRAKTDKKKKEEKVIPSALDITIITPYETQVILKGISTDKILDVTKLLSA
NVETCHFTNYSLSHEVKGPKLNDKLDIATLKPCLLRMVEEDYTEESQVVDHVRRLLDIVA
CTTRFAKPKAGKSTTASAASGGAGLEARAKKPKAQRNASSRPASPSDGVAPTLEPSAPAA
QEENEMVAIHPIPKLSDFYEFFSFSHLSPPILSLKRVDCNNAKTRRDGDYFELQIKICNG
KTLQVVAAAKGFYTLGKPLMRSHCLVDLLQQLSQAFANAYESLMKAFTEHNKFGNLPYGF
RANTWLVPPSIVDSASNIIPLPVEDESWGGDGGGQGRNGEHDHRSWATDFAVLAKLPCKT
EEERVVRDRKAFLLHNLFLDVSIFKAVSAIYQVMNSTSRDNSNCAPGSVLCENRIGDLSI
VVKRDCGEASLKEVKVIDSSDSNVSAEDVAQRNLIKGVTADESVVVHDTSSLSMVVVKHC
GYIAIVKVVGDIQVGKSLPQDIKIDDQPDGGANALNINSLRLLLHKPVTAGFSGGGLLPL
SNLKDSANSMSLVYKIIKDGLSKLKRMDDKSKGSIRWELGSCWVQHLQKQETLAEDKVGN
DGKAEPIVKGLGKQFKMLKKREKKPGNVSSMDDNEADDVTASTLNTESDLTELSNGNPKC
EVEWRRFISQEAYLRLKESGTDLHLKSVNELVEMAHKYYDEVALPKLVTDFASLELSPVD
GRTLTDFMHLRGLQMRSLGHVVELAEKLPHIQSLCIHEMVTRAFKHVLRAVIASVDNVAN
LSAAIASSLNFLFGSSSSQESDENHILKMQWLRNFLVERFGWTLKDEFQQLRKLTVLRGL
CHKVGLELVPKDYDMECPYPFSKSDVISVVPSCKHVGCSSADGRTLLESSKVALDKGKLE
DAVMYGTKALAKMIAVCGPYHRATASAYSLLAVVLYHTGDFNQATIYQQKALDINERELG
LDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEE
GMGNVHIALRYLHEALKCNQRLLGVDHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQI
LQAKLGADDLRTQDAAAWLEYFESKALEQQEAARTGAPRLDASIASKGHLSVSDLLDYIS
PGQGSKTIEEQRKRRSKVLPVDDQSQKGQRDGRSNNPINHDVTENPVTTVEVNKKEDDVE
RVATQEVEGINITNNEEPVEIIHETSSDEGWQEANSKTRAGHVSSKMFNRRQPGLAKIKT
NLEYIFPRDNSSRKEVTPQGQKVVSKNGLGEFSPAKQLKAASFSSSEKSTKLAAKMTVAE
ISHTSNVTVPSPPASLATMASKSLSYKEVAVSPPGTVLKPLLEKVEELNEDKTDSQICVS
PTETSEEDGRHSMTTEATPANDQDRHGIHEDEIQISGSESDKSSLEPEDVSCSSNEEKCL
RRNGSKLSAAAEPFNPGAYHLTHMLISAAVTSVYDVRANQGMLTEPVGFPSIAERVPCGP
RSPLYHRTSHARMKNGYVKYQKPAAEINGYDYPRIMNPHAPEFVPRKTQPTTAASEDSKV
AIDSDSSSGLNNSVPVFSAEEKLDRKVAVNVKNGRSTKSSSHADREELARQIQNSFIVKS
KQNNSDVASEYPVSTKKSEFLVSSAKASADGATKLHGGSEGKKELLVEANKYSGPKTVDV
NKNKHEDGEGFLTVVRRRRNRRQFAHGINGLYSQHSICA
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaagatcaggcaggggaaaaggaaacagagctaaaactgacaaaaagaagaaa
gaagagaaagtgattcctagtgctcttgacataactatcatcactccctatgaaactcaa
gttattctcaagggtatatcgacggacaagatactggatgtaacgaagctactatctgcc
aatgttgaaacatgtcattttaccaactattctttgtctcatgaggtgaagggaccaaag
ctaaatgacaagttagatatcgcgactctcaagccatgtttgctgagaatggttgaagag
gactacacggaggagtctcaggtggtggatcatgttcggaggttactcgacatcgtcgcc
tgcactacccgcttcgctaagcccaaggccggaaaatccactactgcctccgccgcttcc
ggcggtgccggtttggaagctagggcaaagaagcccaaggcgcagcgaaatgcttcaagc
cgaccagcttcgccgtcagatggagtggcacctacactggagccgtcagctccggcggcg
caggaagagaatgaaatggtggcgatacatccaattcctaagctctctgatttctacgag
ttcttctctttctctcacctctctccgcctatactgagtttgaaaagagtggattgtaac
aatgctaaaacaaggcgagatggcgattattttgaattacagattaagatatgcaatgga
aagacattgcaagtggttgcagcagcaaaaggtttctacactttggggaagccacttatg
cgaagccattgcttggtcgatcttctgcaacagctcagccaagcttttgctaatgcatat
gaatccttgatgaaggcttttacagaacataacaagtttggtaatcttccatatggtttc
cgcgccaacacatggcttgtccctccatctattgttgattctgcatcaaacatcattccc
cttccagtggaagatgagagttggggtggcgatggcggaggtcagggaaggaatggagag
catgatcatagatcatgggccacagattttgcagtactggcaaaacttccttgcaaaact
gaggaggagagggtggttcgagaccgaaaggcttttttgcttcataatcttttccttgac
gtctctatttttaaagctgtctcggccatataccaagtcatgaattctacttcgagggat
aactcgaattgtgctccaggttcagtactctgtgagaatcgcattggtgacctgtctatt
gtagttaaaagagattgcggggaggctagcctgaaagaagttaaagttatcgacagttca
gattctaatgtatctgctgaggatgttgctcaaagaaatttaattaaaggagtaactgct
gatgaaagtgttgtcgtacatgacacatcctcattgagcatggtggttgtgaaacattgt
ggttacatagccattgtgaaagttgttggtgacattcaggtgggtaagagtctgcctcag
gatatcaaaatcgatgaccaaccagatgggggagccaatgcactcaacatcaacagcttg
cgccttctgctccacaagccagtgactgctggtttttctggaggtggtctattgcccctg
tctaatttgaaagactctgcaaattcaatgtctttggtctataaaatcattaaggatggt
ttgagtaagttaaagaggatggatgataaatccaaagggtccatcagatgggaacttggt
tcttgttgggttcaacatctacaaaagcaggaaacactagcagaagacaaggttggaaat
gatggtaaggctgaacccatagttaagggacttggaaagcagtttaaaatgctcaaaaag
cgcgaaaagaaaccaggtaatgttagttccatggatgacaatgaagcagatgatgtgaca
gccagcactctgaacacagaaagtgacttgacggaactaagtaatggaaatccaaagtgt
gaagttgaatggaggagatttatctctcaagaagcttaccttcgtttgaaagaaagtggg
acggatctacatctgaagtcagtgaatgaacttgtcgaaatggcacacaagtattatgat
gaagttgctcttccgaagctggttacagactttgcatcgttggaactttctccagttgat
ggacgcacccttaccgatttcatgcatctaagaggattacaaatgcgttctctgggtcat
gtggttgaactagcagagaagcttcctcatatacagtctctctgtatccacgagatggtt
actcgagctttcaagcatgtacttagagctgtcattgcctccgttgacaatgtggccaac
ttgtcagctgctatagcctcatccttaaatttcttgttcgggtcttcttcctctcaagag
agtgatgaaaaccacattctcaagatgcaatggttgaggaattttctggttgaaagattt
ggttggacattaaaagatgaattccaacagttgaggaaattgacggtcctccgcgggctt
tgtcataaggttggattagagttggttccaaaagattatgatatggaatgcccatacccc
ttcagtaaaagtgatgttatcagtgtagtgccttcgtgtaaacatgttggatgctcttct
gctgatggacgaactttactagaatcatctaaggttgctcttgacaaagggaagttggaa
gatgctgtaatgtatggaacaaaggccctggcaaaaatgatagctgtatgtggcccctat
caccgtgccactgcaagtgcatatagcctcctggctgttgtcctttatcacaccggagat
ttcaatcaggcaacaatttatcaacagaaggcattggatatcaatgagagggagctagga
cttgaccatccagatacaatgaaaagttacggggatctttctgtattctactatcgtctc
caacacattgagttggctctaaagtatgtcaaccgtgctttatttcttcttcactttaca
tgtggactatctcacccaaacacggctgccacatatataaatgtggctatgatggaagag
ggcatgggaaatgtgcatattgctcttagatatctacatgaagcccttaaatgcaaccaa
agattattgggagtagatcatatacagactgctgccagctatcatgccatagccatagct
ctttctctcatggaagcatattcgttgagtgtgcaacatgaacaaactacattgcagatt
cttcaagcaaaattaggagcagacgatctccgcactcaggatgctgctgcatggcttgaa
tactttgaatcgaaggccttagagcaacaagaagctgcaagaacaggagctccgagacta
gatgcatccattgctagcaaaggtcatctcagtgtgtcagacctactggattacattagt
cctggccagggttcaaagaccatagaagagcagaggaaacgacgttcaaaggtgttgcca
gtagatgatcaatctcaaaaaggacagcgtgatggaagaagtaacaatcccatcaatcat
gatgttacagaaaatcctgtgaccacagtagaagttaacaagaaagaagatgatgtagag
agagtcgctactcaagaagttgaaggcattaatatcactaataatgaggaaccagtggaa
ataatacatgaaacaagctccgatgaaggttggcaagaagcaaattcaaaaacacgggcg
gggcatgtcagtagcaagatgttcaaccgaaggcaacctggtcttgccaaaatcaagaca
aacttggaatacattttccctcgagacaacagttccaggaaagaagttactccgcaggga
caaaaagtggtatctaagaatggtttaggtgaattttctcctgcaaagcaactaaaggct
gccagcttcagttcttctgaaaagtcaaccaaactcgcagctaaaatgactgttgccgaa
atttctcacacatcaaatgtcactgttccatctcctcctgcctctcttgctaccatggcc
tcaaaatccttatcatacaaagaagtagcagtgtcgccaccaggtacggttctaaagcct
ttattggagaaagtagaagaattaaatgaggataaaactgattcccagatctgcgttagt
ccaactgaaacatcagaagaagatggaaggcactcaatgaccacagaggctacacctgcc
aatgatcaagatagacatgggatccatgaagatgaaatccagataagtggatctgagtca
gataaatcttccctggagcctgaagatgtttcatgttcaagtaatgaggaaaaatgttta
cgacgaaatgggagcaagctctctgcggctgctgaaccattcaatccaggcgcctaccat
ttgactcatatgttgatttctgctgctgtcactagtgtctatgatgttagagccaaccaa
ggaatgcttactgaaccagtgggatttccatcaattgctgagagagttccttgtggtccc
agatcacctttgtaccacaggacaagccatgctcgcatgaaaaatggatatgtgaagtac
caaaagcctgctgctgaaataaatggttacgattatccaagaatcatgaacccacatgca
cctgagtttgttccaagaaaaacacagccaactactgctgcaagtgaagattcaaaagtg
gctattgattctgattcttcctcagggttgaataattctgtcccagtattttcagcagag
gagaagcttgatagaaaggtagcagttaatgtcaaaaatggaagatcaacaaaaagtagt
tcacatgctgacagggaagagctagccaggcaaatacaaaatagcttcattgtgaagtcg
aaacagaataattcagatgttgcaagtgaatatccagttagtacaaagaagtctgagttc
ttagttagctctgccaaagcaagtgcagatggtgcaacgaaattgcatggtggaagtgaa
gggaaaaaggagctcttggtagaagcaaataaatacagcgggccaaagacagttgatgta
aataaaaataagcatgaggatggagaaggttttttgactgttgtaaggcgaagaagaaac
aggcgacaatttgcccatggaataaatggtttgtacagtcagcattctatctgtgcttaa
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integrated database retrieval system
