Solanum lycopersicum (tomato): 101261746
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Entry
101261746 CDS
T02665
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101261746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101261746
Enzymes [BR:
sly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101261746
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101261746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101261746
NCBI-ProteinID:
XP_004229596
UniProt:
A0A3Q7F2E1
LinkDB
All DBs
Position
1:77439393..77456975
Genome browser
AA seq
1184 aa
AA seq
DB search
MGEEKPKSDGSKAMSRPHLVAEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIV
DSFSSLKLRIWFGKPELFPPQKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDG
AVIREKFNFGQFPIMLKSKLCHLRGADDSKKLVAYKEEPSEMGGYFILKGLERVIRLIIL
PKRNYPTSMARNSFRDRREGYSDKAVVIRCVREDQSAVSLKLYYLNNGSARLGFWIQGRE
YLLPVGIILKALVDTTDHEIYVNLTCCYNEECDRVKGSVGTQLVGERAKIILDEVQALSL
FTRAQCLRHIGEHFQPVVIGMQNDSYKTVADAVLRDYIFVHLDNNHDKFNLLIFMLQKLF
SLIDQTSVLDNPDSLQNQEVLLPGHLITIYLKEKLQDWLLKLQRSLQEETDGEKKKFELS
SLTDVKKAIEKNAPKQIGLTIESMLKTGRLATQSGLDLQQRAGMTVQAEKLNFLRFLSHF
RAVHRGASFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTASCRITSYYDSKGN
VKDFFKMRMSILNVLIAIGMTPSSPKLVQAGPPELLSVLLDGRIAGYIPSDLIEKAVTHL
RRLKLSSTSSIPVDLEVGYIPLSMNGAYPGLYLFTSPSRFVRPVRNISAPAEEGNDLELI
GPFEQVYMEISCPDGGDGGRKTLFPATHREIHPTNILSVVGNLTPWSDHNQSPRNMYQCQ
MGKQTMGFSSQALNCRADQKLYHLQTPQTPIVRTKAYEKYCVDDYPLGTNAIVAVLAYSG
YDMEDAMVLNKSSVDRGMCHGHIYQTETIDLTEQSAKSDRAQRLFRRSNLDKSSHQLIDS
DGLPYVGQRINPNEPYCSIYNEITSQTTCMKLKGSEPVVVDYVAVDVKNKAHLQKANIRF
RRSRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLL
ESIAAKGGALHGKFVDATPFSNTMKESESESSSLVDDLGSMLAVCGFNHHGTEVLYSGVY
GTELTCRIFIGPVYYQRLRHMVSDKFQVRSTGQVDHITRQPIKGRKRGGGVRFGEMERDS
LLAHGASYLLHDRLHTSSDHHIADVCSECGSVLTSSVIQPPKRAVQAILKQLPAREPKKV
TCVACRSSKGMETVAMPYVFKYLAAELAAMNIKMTLKLSNEAGA
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagaaaagccaaaatccgacggaagcaaggccatgtcacggccgcatttggtg
gcagagaaagattactcagctttgaaagagcttttcagtcatcatattgaatcatttgat
tatatggtcgataatggacttgaaaccatgctcttgaatatcaagcctattgaaattgtt
gattccttttcctcgctcaagctaagaatctggttcggcaaacctgaattattcccacct
caaaaagaacgcgcttccaaggccatgcatgatgctttatatccttttgagtgtagacaa
gctaaaatttcatattcaggaaagtttttggtggatatctgtttccagtatggtgatgga
gctgtaatccgggagaaatttaattttggacagttccctatcatgttgaagtcaaagcta
tgtcacttgagaggtgctgatgactccaagaagttagttgcttacaaggaagagccatca
gaaatgggcggatatttcattctgaaagggcttgagagagttattcgtcttataattttg
ccaaagcgaaactatccaacaagtatggcacggaattcatttcgtgataggcgagaagga
tattctgataaagctgttgttataagatgtgtaagggaagatcaatctgcagtctcactt
aaattgtattatctaaacaatggaagtgcaagacttggattctggatacaaggaagggaa
tacttgcttcctgttggtatcatcttaaaggcccttgttgacaccactgatcacgagata
tacgtcaatttaacatgttgctacaatgaggaatgtgaccgtgtaaagggatctgtcggc
acccagcttgttggtgaaagagcaaaaattatcctggatgaagttcaggccctatctctt
tttacccgagcacagtgcctgcgacatattggggagcatttccaacctgttgtgatcgga
atgcaaaatgatagttacaaaactgttgctgatgctgtgcttagagactacatatttgtc
catctggataacaatcatgataaatttaatctacttatctttatgttgcagaagcttttc
tctctgatagatcagacatctgtcctagacaatccagactctctgcaaaatcaagaagtt
ttgctgccgggtcacttaattaccatatatctgaaggaaaagctacaagattggctactt
aaattacaacggtcacttcaagaagaaactgatggtgaaaaaaagaagtttgagctaagt
agcttgacagacgtcaagaaggctattgaaaaaaatgctcccaaacagattggcttgact
attgagagcatgttgaagactgggagattggctacacaatcaggtcttgatttgcagcag
agagctggaatgactgtccaggcagaaaagttaaatttcctccgttttctttcacatttt
cgagcggttcatcgaggtgcctcatttgctggtcttcgtactacaagtgtgcggaagttg
ttacctgaatcttggggtttcctttgtcctgttcacacacctgatggggagccatgtggg
ttgcttaatcatatgactgcatcttgccgcataacctcatactatgattcaaagggcaat
gttaaagacttcttcaaaatgcggatgtccatattgaatgtgctgattgcaattggaatg
acaccatcatcaccaaagcttgtgcaagctggtcctcctgaattgctgtctgtcctactg
gatggtcgtattgcgggctatataccgtcggatttaattgaaaaggctgttacccacttg
cggagattgaaattgtcatcaacatcatcgattccagttgatttggaggttggatacatc
cctttgagcatgaatggagcatatccaggcctatatctgttcacatctccttctaggttt
gttcgtcctgtaagaaacatctctgcgcctgctgaagagggcaatgatcttgaactcatt
ggaccctttgaacaggtgtatatggagataagctgcccggatggtggagatggaggaagg
aaaaccttattccctgccacacatcgagaaattcatccaactaatattttgagtgttgtt
ggcaatcttacaccttggtctgatcataatcagagtccacgtaatatgtatcaatgtcag
atgggtaaacaaacaatgggtttctcctcacaagcattaaattgtcgtgctgatcaaaag
ttatatcaccttcagactcctcaaaccccaattgtacgcacaaaagcttatgagaagtat
tgtgttgatgactatccattaggaacaaatgcaattgtggcagttttggcttattcagga
tatgacatggaagacgctatggtcttaaataaatcatctgtagatcgtggtatgtgtcat
gggcatatataccagacagaaaccattgacttgactgagcaaagcgccaaatctgatcgt
gctcagagattgtttagaagaagcaatttggataagtcgtctcatcagctgattgattct
gatggtcttccatacgtgggacagaggattaatccaaatgagccatattgtagtatttac
aatgaaataaccagtcagacaacttgtatgaagttgaagggttcggagcctgttgttgtt
gattatgttgctgtcgatgtgaaaaataaagcacatctgcagaaggcgaatatacgtttt
aggcgctccaggaatcctgtaattggtgataaatttagcagccgacatgggcaaaagggt
gtttgctctcaattatggcctgatgttgatatgcccttctcagcagttacaggcatgagg
ccagatcttattattaatcctcatgctttcccttcaaggatgacaattgctatgctgttg
gagtcgattgctgctaaggggggtgctttacatgggaagtttgttgatgcaacgccgttc
tctaacacaatgaaggaatcagaatcggaatccagttcacttgtggatgaccttggttcc
atgttagcggtttgtggcttcaatcaccatggtacggaagtactatatagtggagtatat
gggacagaactgacttgtcgaatatttattggacctgtttattatcagcgtctgcgacac
atggtttctgataaatttcaggtccgttctactggacaggtagaccatatcactcggcag
cctatcaaggggagaaagcgtggtggaggtgtccgctttggtgaaatggaacgagattca
ctccttgctcatggagcatcatatttgctgcatgatagactccatacaagctcagatcat
cacattgcagatgtgtgctctgaatgtggaagtgtcctaacatcatctgttattcagccg
ccaaaacgagcagtgcaagcaattctgaaacagctacctgctagagaacccaaaaaggtt
acttgtgtcgcttgtcgttcaagtaaaggaatggagactgttgctatgccttatgtgttt
aaatatttagcggctgaactggcagccatgaacatcaagatgaccctcaaactaagtaat
gaggctggagcttga
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integrated database retrieval system
