KEGG   Solanum lycopersicum (tomato): 101261863
Entry
101261863         CDS       T02665                                 
Name
(RefSeq) uncharacterized protein
  KO
K24755  WD repeat-containing protein 76
Organism
sly  Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:sly00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sly04121]
    101261863
   03036 Chromosome and associated proteins [BR:sly03036]
    101261863
   03400 DNA repair and recombination proteins [BR:sly03400]
    101261863
Ubiquitin system [BR:sly04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101261863
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101261863
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     101261863
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     101261863
SSDB
Motif
Pfam: WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40 WD40_WDHD1_1st EIF3I Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 101261863
NCBI-ProteinID: XP_004231489
LinkDB
Position
2:complement(31943043..31946261)
AA seq 474 aa
MSAKKLTDYERRRIENIKRNEELLASLQIQSRISQLSSETKRPRAQGKSHQRSTQKKQKS
NSPIVLRRSLRSQGIPPDSSAAGGPKENIDDNSQPTDKNSPSEPIPISMSDAYDGDFDIP
NKKFIETIKGFDDENMDKNSVLGDRIGKKKASGIVNLESLRLEPDNIARVVPGRILNVRF
FPTNNVRMVAVGNKYGNIGFWNVDAPQEDGDVIFLYRPHSGPVSGILVEPFSVSKMITSC
YDGLIRVMDIEKEMFDLAYMSEHPIFSISQRSHDVKSIYYGEGKGELGIWDLRAGKSSAL
WNLHEDRINTIDFTSENCNIMATSSTDGSACIWDLRKVGAHKPKSLQTVFHKRAVHSAYF
SPSGRRLATTSIDNNVGVLSGANYEDTSMISHTNHTNRWISSFRGIWGWDDSYIYIGNMQ
RGVDAISVPDKKLHCTLRSKHMTAIPCRFDAHRKEVGMLAGATSGGQVYIWTAS
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtcggcgaagaaattgacggattacgaacggcggaggattgagaatataaaacgcaat
gaagaattgcttgcctcccttcagattcagtcacgaatttctcaactttcttctgaaaca
aagcgtccaagagctcaaggcaaatcacatcagcgaagtacacagaagaaacaaaagtct
aactcaccgattgtgctgcggcggtctctcaggagtcaaggtattccaccggattcctct
gccgccggtgggccaaaagagaatattgatgacaactcacaacctactgacaaaaactca
ccttcagaacctattcccataagtatgagtgatgcgtatgatggtgattttgatatccca
aataagaaattcattgaaacaattaagggttttgacgacgagaacatggataaaaattct
gttttaggtgacaggatagggaaaaaaaaggcttctggtatagttaatttggaatcgttg
aggttggaaccagacaacatagcacgggttgtgccaggaagaatattaaatgtgcgtttt
tttcccaccaacaatgttcgaatggttgctgtagggaacaaatatggcaatataggtttc
tggaatgttgatgctccacaggaggatggagatgtgatttttttgtaccgtcctcattcg
gggccagtttcaggaatacttgtggaacctttttctgtgtcaaagatgatcacttcttgc
tatgatggattaatcagggtaatggacattgaaaaggaaatgtttgatttggcatatatg
agtgaacatcccatattttccatatcacagagatcgcatgatgtgaagtccatatattat
ggtgaaggcaagggggaacttggtatttgggatctaagggcaggaaaatcttcagcattg
tggaatttgcatgaagataggatcaacacaatagattttacctctgagaactgtaatatt
atggctactagttctacagatggtagtgcatgcatttgggatttgagaaaagttggtgca
cataaaccaaaatctttacaaactgtcttccacaaaagagcagtacactcggcttacttt
tcaccttcaggaaggcgtcttgccacaacaagtattgataataatgttggtgtgttgagt
ggcgctaattatgaagatacatctatgatctcccatactaatcacacaaacagatggatt
tcctcgttcagaggaatatggggttgggatgattcctacatctacattggtaatatgcaa
agaggagttgatgcaatctcagtacctgacaagaaacttcattgtaccttaagaagcaag
cacatgactgctattccatgccgttttgatgcacatcgcaaagaagttggaatgcttgca
ggggctacaagtggtgggcaggtatatatctggacagcatcttaa

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