Solanum lycopersicum (tomato): 101261914
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Entry
101261914 CDS
T02665
Name
(RefSeq) uncharacterized protein isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101261914
Enzymes [BR:
sly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101261914
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
101261914
NCBI-ProteinID:
XP_004238020
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Position
4:complement(63362760..63369053)
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AA seq
650 aa
AA seq
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MIVPKHSQISSPVLQLLQHEDQVVIYNGIFQLRLTNPGGKIIGIQYNGIENLLELHNPIL
NGGFWDLNWSVPGTSGTRGKFDEIECNSSKVIVETEEQIELSFIRTWDPSLQGDQSPLTI
DIRYIVLRDSPGFYSYAIYEHKENMPAFNLNETRIAFMLSFEKFRYMAMADDRQRPMPLP
EDRLPPRGKELAYPEAVLLVDPVEPEFKGEVDDKYQYSCENKDNKVHGFICLDPPVGFWQ
ITPSNEFRTGGPIKQDLTSHVNPTTLAMFMSTHYGGQDFVTQFGSGEQWKKVFGPVFIYL
NSVADKNDALSLWDDAKEQMHKEVDCWPYSFTSSEDFPKADQRGAIRGRLLVNDRCISKE
YLSAKGAFVGLAPPGDAGSFQRECKGYQFWTNSDDEGYFSIQNVRLGDYNLYAWVPGFIG
DYKYEKSIAITAASDVDIGELVYEPLRSGPTLWEIGIPDRSAAEFYVPDPDPQYINKLYI
NQPENRFRQYGLWERYADLYPDQDLVFTIGSSDYKKDWFYAQVTRKVGDKAYKPTTWQIK
FNLESIDQNGSYTLRIALSSATFSILEVRVNEEEANPPHFSSGLIGSDNTIARHGVHGLY
WLFNVEVAAGQLFQGENIIYLKQARSVSALHGIMYDYIRLEAPPLSTTRY
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaccaaaacattcacaaatatcaagtccagttctgcagcttcttcagcatgag
gaccaagtggtaatatataatggcatattccaactcagattgacaaatccaggaggaaaa
atcattggaattcaatataatgggattgaaaatttgttggaactccacaacccaatcttg
aatggagggttctgggacttaaactggagtgtacctggaacttctggaacaagaggaaaa
tttgatgagattgaatgtaatagttctaaagttatagtggaaactgaagaacagatagag
ctctcctttataaggacatgggatccttcacttcagggcgaccaatccccgttaaccata
gacataaggtacatagttcttcgtgattcgcctggtttttactcttatgctatttatgaa
cacaaagagaatatgccagcattcaacctcaacgaaaccaggatagctttcatgctcagc
ttcgaaaagtttcggtacatggctatggcagatgataggcaaagaccaatgccccttcct
gaagatcggttacctccaagagggaaggaattggcatatccagaagccgtcctgctagtc
gatcctgtggagccagaattcaaaggagaagttgatgacaagtatcagtattcgtgtgag
aacaaagataacaaagtccatggcttcatttgcttagatcctcctgtgggattctggcaa
attacgccaagcaatgagttcagaacaggtggacctatcaaacaggatcttacttctcat
gttaatccaacaactcttgctatgttcatgagcactcattatggaggccaggatttcgtg
actcaatttggatcaggcgaacaatggaagaaagtttttggacctgtttttatatatctc
aattctgtagcagacaagaatgatgcactttccctatgggatgatgcgaaagaacagatg
cacaaagaagtcgactgttggccttatagtttcacgagttcagaagattttccaaaagct
gaccaaagaggtgccatccgtggtagattattagtcaatgacaggtgtataagcaaggag
tatttgtctgcaaagggtgcttttgttggcctagctccacctggagatgctggatcattt
caaagagaatgcaagggctaccaattctggacgaactcggatgatgaaggctatttctct
atccaaaatgttcgtctgggggactataacctctatgcttgggtacctggcttcattgga
gattacaaatatgaaaaatccatagcaattactgcagcttctgatgttgatatcggtgaa
cttgtgtacgagcctctaaggagtggtcctacattgtgggagatcggtatccctgatcgt
tctgctgcagaattctacgttcctgaccctgatccacagtatatcaacaaactttacata
aaccaaccagaaaacaggtttagacagtacggattatgggagagatatgcagatttatat
ccagatcaagatttggtatttacaattggaagtagtgactataaaaaagattggttctac
gctcaggtgacaagaaaagttggtgataaagcatataaacctacaacatggcaaattaaa
ttcaatttagaaagcattgatcagaatggaagttacacactccgtattgcgctctcatct
gcaactttctctatattggaggtaagggtgaatgaggaagaagcaaatccaccacatttc
tcaagtggattgattggaagtgataatacaattgccagacatggagtccatgggctgtat
tggttgtttaatgtggaggtagctgcaggacaactctttcaaggagagaacatcatatat
ctcaaacaagcacggagcgtcagtgctctccatgggattatgtatgactatattcgtctg
gaagctcctcctctttccaccacgcgttattag
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