Solanum lycopersicum (tomato): 101261967
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Entry
101261967 CDS
T02665
Name
(RefSeq) syntaxin-112
KO
K08486
syntaxin 1B/2/3
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101261967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101261967
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sly04147
]
101261967
Membrane trafficking [BR:
sly04131
]
SNARE
Syntaxin (Qa)
Stx-PM
101261967
Exosome [BR:
sly04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
101261967
Exosomal proteins of other body fluids (saliva and urine)
101261967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
RS_preATP-grasp-like
DUF7153
DUF6649
Enkurin
V_ATPase_I
DUF5340
Motif
Other DBs
NCBI-GeneID:
101261967
NCBI-ProteinID:
XP_004230942
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All DBs
Position
1:complement(92703983..92705510)
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AA seq
280 aa
AA seq
DB search
MNDLMTKSFLSYVELKKQAMMDVEAGPDIEMGQLDPTDERNLSKFFEEVAVIKSDMEEIN
NLQDLNRKTKSAPSAKILQGHRDQINSDIITVLRKAKMIKTRLELLDKSNLDNRGVSGSP
VDRTRISVTNGLRIKLRDMMNDFQCLRENIVAEHKEGLRKQYSNANGKEPSEEAIEKMMQ
ERVIEKGVVENQDRHEAVKEIQKSLVELHQVFLDMAVMVETQGDQMNNIEQNVVNAGGYV
NGGMKELDRANRMKRTRTWACWIGALVLVFLLICLIAILF
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacctgatgacgaaatcattcttaagttatgtggaattgaagaagcaggctatg
atggatgttgaagcagggcctgatattgagatgggtcaactcgacccgactgatgaaaga
aacctctcaaaattctttgaagaagttgctgtaattaagtctgatatggaagagattaac
aatcttcaagaccttaatcgaaaaaccaaatcagccccgagtgccaaaattcttcaagga
catagagatcagattaactctgacattattactgttcttagaaaggcgaaaatgatcaaa
acaagacttgaattgctagataaatccaatcttgacaatcgtggcgtgtcaggaagtcct
gttgatcgaacgaggatttcagtgactaatggtttgagaattaaactgagggatatgatg
aatgattttcagtgtttaagggaaaacattgtagcagaacacaaagaaggcttaagaaaa
cagtatagtaatgctaacgggaaggaaccgagcgaggaggcgattgaaaagatgatgcaa
gaaagggttattgaaaagggggtggtggagaaccaggatagacatgaagctgtgaaagag
atacagaaaagcttggttgagctgcaccaagtgtttcttgacatggctgttatggttgag
acacaaggtgatcaaatgaacaatattgagcaaaatgtggttaatgctggtggatatgtg
aatggtgggatgaaggagttagatcgtgctaatcgaatgaagagaacgaggacttgggct
tgttggattggcgcgttggtgctggttttcttgttgatatgccttattgcaattctattt
tga
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