Solanum lycopersicum (tomato): 101261995
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Entry
101261995 CDS
T02665
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3
KO
K21444
poly(rC)-binding protein 3/4
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sly03019
]
101261995
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101261995
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-GeneID:
101261995
NCBI-ProteinID:
XP_004234980
UniProt:
A0A3Q7FKF4
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Position
3:49592604..49599686
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AA seq
668 aa
AA seq
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MDRSRSKRYYYDQDYESENLPRTKQRYNNPHHYAPTAHHRRPVSGGGGGGRKMQDPALMV
TTTYRILCHDVKAGGVIGKSGSIIKAIRQHTGAWVNVHELIPGDDERIIEISDTRRRDPD
GRMPAFSPAQEALLMIHERILDSDSGGGGYSGGMDVEEEFRMRGVSGSNRAVTRLVVTRM
HVGCLLGKGGKIIEQMRIETKTHIRILPRDHSLPRCVSMSEEIVQVVGEVNAVKKAVEII
SSRLRESQHRDRGHFPGRPHSPERFLPPDDEFIPHMNSTARRLSENGSAFGSRLPAGMSG
GRSNNYSSSSSGYAIESGIAPNNDNGQVMYVEDLVFRILCPVDKVDTVAGESDGIIELLQ
NEIGVDVKILNPVAGSDEQVIIISSDEGPDDELFPAQEALLHIQTRIVDLVPEKENVITT
RLVVQTDEVECLGGRDGLLSDMQKITGATVKILPKEELPPCVSRTDEVIQIVGEIKAARE
ALVEVTSRLRSFTYRNFFQKDIPSPAIPASSPARSTIGADKNSFNNTSPSQQNYSVNDVP
TSIYQNTPAKPISQPVKETGASASEITKQNESERREDIPSGLNRMHVTLVTRSILEVVIP
PHAAPKLITKSRNKLAQISELSGANVKLIEDRPEVTDKIIQISGTPEQAERAQSLLQGFI
LSTLEDGP
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggacagatcaagatctaagagatactattacgaccaggattatgaatccgagaactta
cccaggactaaacagaggtacaacaaccctcaccattatgcaccgacggctcatcacaga
cgtcctgtttccggtggaggtggaggaggtaggaaaatgcaggaccctgcacttatggtt
actactacttaccggattttatgtcacgatgttaaggcgggtggtgttattgggaaatca
gggagtattattaaggcgattaggcagcatactggggcatgggtgaatgtacatgaactg
attccaggagatgatgaacgtatcattgagatttcggacactcggaggagggatcctgat
ggtagaatgccggcgttttcgccagctcaggaggcattgctgatgatacatgagaggatt
ttggatagtgatagtggtggaggagggtacagtggtgggatggatgtggaggaggaattt
aggatgagaggtgttagtgggagtaatcgcgccgtaacaaggttggtggtgactagaatg
catgtgggatgtttgctagggaaaggagggaaaattattgagcaaatgaggattgagact
aagacacatattagaattttgcccagagatcacagtttgccgcgttgcgtttcaatgtca
gaggagattgttcaggttgttggggaagtaaatgctgtgaaaaaggctgtagaaattatt
tcctcacgcttgagggagagccagcatcgtgatcggggtcactttcctggtcggccacat
tctcctgaacggtttctccctcctgatgacgaatttattccccacatgaacagtacagct
cgcaggctgtctgaaaatgggtctgcttttggatcaaggcttcctgctggtatgagtggt
ggtcgaagcaataactattcctcatcctcatctggatatgccattgaatctggaatcgct
cccaacaatgataatgggcaggtcatgtacgttgaagatcttgtgttccgaattctatgt
ccagttgacaaggttgatactgttgctggggaatcagatggaattatagagttgcttcag
aatgagattggtgtggatgtgaagattttgaatcctgttgccggctcagatgaacaggtc
ataatcatttcatctgatgagggtccagatgatgagctgtttcctgctcaggaagctctt
ttgcatattcaaacccgcattgttgatcttgttccggagaaggaaaatgttattacaact
cgtttagttgtgcaaacagatgaagttgaatgtttgggaggaagagatggactattatct
gatatgcagaaaataactggtgctactgtcaagattctaccaaaggaagaacttccacca
tgtgtgtcaaggactgatgaagttatacagattgttggagagatcaaagcagctagagaa
gctcttgttgaagtgacatcgaggcttcggagttttacttatcggaatttctttcaaaag
gatataccctcaccagcaatacctgcatcaagccctgctaggagtactattggagcagac
aaaaattctttcaataacacatctccatctcaacaaaactacagtgtgaatgacgttcca
acttcaatctatcaaaatacaccagccaaaccaatctcacagccagtaaaagaaactggg
gcatctgccagtgaaataaccaagcaaaatgaaagtgagcgtcgtgaagatattccgagc
ggattgaatagaatgcatgtaacattggtcactagaagtattttggaagttgtcatacct
ccacatgcagcgcccaaactgataacaaaatcaagaaataagcttgctcagattagtgag
ttgtcaggagcaaatgttaaattgattgaggataggcctgaggtaacagataagatcata
cagatatcaggcactccggagcaagcagagagagctcaaagcctgcttcaaggatttatt
ttaagcactctagaagatggcccctga
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