Solanum lycopersicum (tomato): 101262018
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Entry
101262018 CDS
T02665
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 8 isoform X2
KO
K21343
ubiquitin carboxyl-terminal hydrolase 15 [EC:
3.4.19.12
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sly01002
]
101262018
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sly04131
]
101262018
04121 Ubiquitin system [BR:
sly04121
]
101262018
Enzymes [BR:
sly01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101262018
Peptidases and inhibitors [BR:
sly01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101262018
Membrane trafficking [BR:
sly04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
101262018
Ubiquitin system [BR:
sly04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101262018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
USP7_C2
DUSP
Motif
Other DBs
NCBI-GeneID:
101262018
NCBI-ProteinID:
XP_004241355
LinkDB
All DBs
Position
6:complement(48147417..48160026)
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AA seq
875 aa
AA seq
DB search
MDNPSEDSSQQQQTESSVKDDQRVYFVPYRWWKEAQDSAPSDGKSATLYAVAPAPSYGAM
KLINNIFSPDIAFNLRREEESLSQSQENGEVGVSGRDYALVPGDMWLQALKWHSNSKAAA
KNGKSFSVTDEDIADVYPLQLRLSVSRETSSLGVRISKKDNTVECFRRAYRIFSVDTEPS
RIWDLSGQTALFFSNESNDMIKDSQKQSEQDLLLELQVYGLSDSVKNKAKKDEMSVSYLN
GSSLLMNGSGSGITSNLTRSSSSSFSGGSCEAGTLGLTGLQNLGNTCFMNSALQCLAHTP
KLVDYFLGDYKREINHDNPLGMKGEIASGFGDLLKKLWAPGASPVAPKTFKVKLSHFAPQ
FSGFNQHDSQEVLAFLLDGLHEDLNRVKDKPYVEAKDGDDRPDEEIADEYWHYHLARNDS
IIVDVCQGQYRSTLVCPVCKKVSVMFDPFMYLSLPLPSTSMRSMTLTVIESGSDLQISTF
TITVPKDGKLEDLIRALSIACSLESDETLLVAEIYNNRIIRYLEEPSDSLSLIRDGDRLV
AYRLHKGTEEAPLVMFTHQQIDEHYIYGKLTSNWKAFGIPLAAHGRVLKGSDVCSLYLQL
LVPFLVQNRAQMDEHNFDRSSTEVRTEMEPDDKRVNGFPARIAEENAAEHLDMEFHFYLS
DDKAITKGAEIVMNEPLKSTDIPGRLNVLVNWSPKMVEKYNTSLFSSLPEVFKSGFFGKR
PQDSVSLYKCLEAFLKEEPLGPEDMWFCPGCKEHRQATKKLDLWRLPEILVIHLKRFSYS
RFIKNKLETYVDFPTHDLDLSSYMAYKDGKSSYRYMLYAISNHYGSMGGGHYTAFVHQGA
DRWYDFDDSHVSPINKDKIKTSAAYVLFYRRVEET
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggataacccatcggaggattcttctcaacagcaacagaccgaatcttctgtaaaagat
gaccagcgagtttatttcgttccttacaggtggtggaaggaagcacaggattcagcacca
tcagatgggaagtcggctaccttgtatgcagtagcaccagctccatcttatggagcaatg
aaactcattaacaacatatttagcccagatatcgcatttaacttgaggagagaggaggaa
tccttatcacagagtcaggagaatggtgaagttggggtatcaggccgggactatgcgtta
gtccccggcgacatgtggctgcaggcactcaaatggcacagtaactctaaagctgctgct
aagaatggaaaaagcttttcagttacagatgaggatattgcggatgtctatcctttacag
ctgaggctttctgtttcacgggaaaccagttccttaggagtcaggattagcaaaaaggac
aatacagttgagtgctttagaagagcttacagaatttttagtgtggatacagaaccctca
aggatttgggatttatctgggcagacggcgttgtttttttcaaatgaaagtaatgatatg
atcaaagactctcagaagcagtcagagcaagatctgctcttggagttgcaggtttatggg
ttatcagattctgttaaaaataaagcaaaaaaggatgagatgtcagtatcataccttaat
ggttcttctcttctgatgaatggttctggcagtggtataacctctaatctcactaggagc
agttcctcatctttttctggaggttcatgtgaagctggtaccttgggtttgactggattg
caaaacctagggaacacctgtttcatgaacagtgctctccagtgccttgcacatacgcca
aagctcgttgattactttcttggggactacaagagagaaataaatcatgacaacccattg
ggaatgaaaggagaaattgcctctggttttggtgaccttctgaagaaattatgggctcct
ggagctagtcctgtggcaccaaaaacattcaaagtaaagctctcacattttgctcctcaa
ttcagtgggttcaatcagcatgattctcaggaggtcttagcttttctattagatggactt
cacgaagatttgaaccgcgtcaaggataagccttatgttgaagctaaggatggagatgat
cgtccagatgaagaaatcgctgatgaatactggcactatcatctggctcgtaatgattcc
atcatagtggacgtgtgccaaggccaatatcgctccacattggtgtgtcctgtttgcaaa
aaggtctccgtcatgtttgatccattcatgtatttatcactgcctctgccatctacatct
atgaggtcgatgactctcacagttatagaaagtggcagtgatcttcagatatctacattt
acaatcactgttcccaaggatggaaagcttgaagatctaattcgtgctttgagcattgca
tgttctttggagtctgatgagacccttttggtggctgagatatacaacaaccgcattata
cgttatcttgaggagccatccgattcattgtctttaataagagatggtgaccgacttgtt
gcttatcggttgcacaagggtactgaagaagcccccttggttatgtttacacatcaacag
atcgatgagcattatatatacgggaagctgacttcaaattggaaggcgtttggtattcca
cttgccgcacatggtagagttcttaaaggatctgatgtctgtagtctttatctgcagtta
cttgtaccattcttagtccaaaatagagcccagatggatgagcataactttgatagaagt
tctactgaagtacgtacagaaatggaacctgatgacaaaagagtaaatgggtttccagcg
agaattgctgaggaaaatgctgccgaacatttagatatggaatttcatttttatctatca
gatgataaggcaattactaaaggcgctgagattgtaatgaatgagccattaaagtccaca
gatatccctggacggttaaatgtacttgtaaattggtcacctaaaatggttgaaaaatac
aatacaagtcttttcagctcacttcccgaagttttcaaatctgggttttttggcaagaga
cctcaagattctgtctcactgtataaatgtcttgaggcatttctgaaggaagaacctcta
gggccagaagatatgtggttttgccctggatgtaaggagcatcgccaagccactaagaag
ttggatctttggagactgccggaaattctggtcatccacctgaagaggttctcatacagc
cggtttataaagaacaagttggagacatacgttgacttccccactcatgatctcgattta
tcctcatatatggcctacaaggatggaaaatcttcctatcggtatatgctttatgcaatt
agcaaccattatggaagcatgggagggggtcactatactgcatttgttcatcaaggtgct
gatcggtggtatgacttcgatgacagccatgtgtctcccatcaacaaggacaagatcaaa
acctcagcagcgtatgttctgttttatagacgagttgaagaaacctaa
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