Solanum lycopersicum (tomato): 101262023
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Entry
101262023 CDS
T02665
Name
(RefSeq) lariat debranching enzyme isoform X1
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sly03041
]
101262023
03009 Ribosome biogenesis [BR:
sly03009
]
101262023
Spliceosome [BR:
sly03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101262023
Ribosome biogenesis [BR:
sly03009
]
Eukaryotic type
90S particles
RNase
101262023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
101262023
NCBI-ProteinID:
XP_004242903
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All DBs
Position
7:10024969..10035323
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AA seq
418 aa
AA seq
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MRIAVEGCMHGDLDNVYATLLHLQEVQNIKIDLLLCCGDFQAVRNEKDLESLNVPPKFRS
MNSFWKYYSGEKVAPFPTIFIGGNHEASNYLWELYYGGWAAPQIYFLGFAGVIKFGNIRI
GGLSGIYKSHHYNMGHYEKLPYSEQDIRSIYHVREYDVHKLLQIEEPIDIFLSHDWPVGI
TACGDLKALLRQKPFFEQEIQEGTLGSKPAAELLGKLRPSYWFSAHLHCKFAALVQHEKD
GHSTKFLALDKCLPGRNFLQVIEIESGPGPHELQLDEEWLAITRKYNAVFPLTIKNANYN
SVHLGTEQCLQFVRNKLQTRGSKPFEFVQTAPCYKPSQPVADGVFHGFYKNPQTEALLQF
LELEYLLNKMPESRKPAANLAPLISGCSFDYLGEDIPIDDIDDTEDSKEVDPEYAQEG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaggatagctgtagaagggtgtatgcacggagacttggataatgtttatgccacctta
ttgcatttgcaagaagttcaaaatataaagattgatctccttttatgctgcggcgacttt
caggctgttaggaatgagaaggatctggaaagcttaaatgtgccacctaaattccggagc
atgaactctttctggaagtattactctggagagaaagtagcaccgtttccaactatattt
attggaggaaaccacgaagcatccaattacctttgggaactgtactatggaggatgggca
gcacctcagatatacttccttggatttgctggagtaataaagtttggcaacattcgaatt
ggtggcctttctggaatttataaatcacaccattacaatatggggcactatgagaagcta
ccttatagtgaacaggatattcgatcgatatatcacgttcgcgagtatgatgtccacaag
ctcttgcaaattgaggaaccaattgatatctttctttcacatgactggcctgttggcatc
accgcctgtggggacttgaaagctcttcttcgtcaaaaacctttctttgagcaagagatt
caggaaggaactctgggaagcaaacctgctgcagaattactgggaaagttgaggccgtct
tactggttttctgcacatctgcactgcaaatttgctgctttagttcagcatgagaaggat
ggtcattccactaagtttcttgctcttgataagtgcctccctggtagaaactttttgcag
gttatcgaaattgagtccggaccaggaccacatgaacttcaacttgatgaagaatggttg
gctatcacaagaaagtataatgctgtcttccccttgacaatcaagaatgcgaactataat
agtgtgcatctcggcacagaacagtgcctccagtttgtaagaaataagctgcagacaaga
ggatccaagccgtttgaatttgttcagactgcgccatgctacaaaccttctcaacctgta
gctgacggtgtcttccatggtttctataaaaaccctcagacagaagctcttctacagttt
ctggaacttgagtatcttctcaataaaatgccagaatcaaggaagcctgctgcaaatcta
gccccattaatttcaggatgttccttcgattacctcggtgaagatatacccatagatgat
atagatgatacagaggattccaaagaggttgacccggaatatgctcaagaaggataa
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