Solanum lycopersicum (tomato): 101262050
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Entry
101262050 CDS
T02665
Name
(RefSeq) ubiquitin-ribosomal protein eL40 fusion protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03010
Ribosome
sly04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
101262050
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101262050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sly03011
]
101262050
04121 Ubiquitin system [BR:
sly04121
]
101262050
Ribosome [BR:
sly03011
]
Ribosomal proteins
Eukaryotes
Large subunit
101262050
Archaea
101262050
Ubiquitin system [BR:
sly04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
101262050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
zf-C4pol
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
DUF2604
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
101262050
NCBI-ProteinID:
XP_004230014
UniProt:
K4B017
Structure
PDB
PDBj
LinkDB
All DBs
Position
1:83239961..83241891
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQEKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaactcttacggggaagacgatcacgcttgaagttgaatcgagc
gacactattgacaatgtcaaagctaagattcaagacaaggaaggtattccaccggaccag
cagcgattgatcttcgccggaaagcagctcgaagatggacgtactctagctgattacaac
attcagaaagagtcaactttgcatttggttttgaggcttcgtggagggattattgagcct
tctctgatggctttggcaaggaagtataatcaggagaagatgatttgccgcaagtgttat
gctcgcctccatcctcgtgctgtgaactgcaggaagaaaaaatgtgggcacagcaaccag
ctgaggccaaagaagaagatcaagtag
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integrated database retrieval system
